RNA–Protein interactions for RNA: ENST00000411798.1

AL356479.1-203, humanhuman

TSL 1 (best) BASIC

Gene AL356479.1, Length 1,440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL356479.1-203ENST00000411798 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
AL356479.1-203ENST00000411798 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.59
AL356479.1-203ENST00000411798 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
AL356479.1-203ENST00000411798 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
AL356479.1-203ENST00000411798 FOXD1Q16676 465 aa21.08■□□□□ 0.97
AL356479.1-203ENST00000411798 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
AL356479.1-203ENST00000411798 MSH5O43196 834 aa19.68■□□□□ 0.74
AL356479.1-203ENST00000411798 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
AL356479.1-203ENST00000411798 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
AL356479.1-203ENST00000411798 ADRA2BP18089 450 aa19.56■□□□□ 0.72
AL356479.1-203ENST00000411798 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
AL356479.1-203ENST00000411798 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
AL356479.1-203ENST00000411798 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
AL356479.1-203ENST00000411798 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
AL356479.1-203ENST00000411798 NISCHQ9Y2I1 1504 aa17.73■□□□□ 0.43
AL356479.1-203ENST00000411798 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
AL356479.1-203ENST00000411798 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
AL356479.1-203ENST00000411798 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
AL356479.1-203ENST00000411798 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
AL356479.1-203ENST00000411798 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
AL356479.1-203ENST00000411798 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
AL356479.1-203ENST00000411798 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
AL356479.1-203ENST00000411798 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
AL356479.1-203ENST00000411798 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
AL356479.1-203ENST00000411798 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
AL356479.1-203ENST00000411798 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
AL356479.1-203ENST00000411798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
AL356479.1-203ENST00000411798 ABCC9O60706 1549 aa16.16■□□□□ 0.18
AL356479.1-203ENST00000411798 KCNA4P22459 653 aa16.04■□□□□ 0.16
AL356479.1-203ENST00000411798 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
AL356479.1-203ENST00000411798 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
AL356479.1-203ENST00000411798 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
AL356479.1-203ENST00000411798 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
AL356479.1-203ENST00000411798 CAPN15O75808 1086 aa15.74■□□□□ 0.11
AL356479.1-203ENST00000411798 DSG3P32926 999 aa15.74■□□□□ 0.11
AL356479.1-203ENST00000411798 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
AL356479.1-203ENST00000411798 ABCB7O75027 752 aa15.4■□□□□ 0.06
AL356479.1-203ENST00000411798 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
AL356479.1-203ENST00000411798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
AL356479.1-203ENST00000411798 APLP2Q06481 763 aa15.37■□□□□ 0.05
AL356479.1-203ENST00000411798 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
AL356479.1-203ENST00000411798 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
AL356479.1-203ENST00000411798 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
AL356479.1-203ENST00000411798 POTEHQ6S545 545 aa15.26■□□□□ 0.03
AL356479.1-203ENST00000411798 NACADO15069 1562 aa15.17■□□□□ 0.02
AL356479.1-203ENST00000411798 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
AL356479.1-203ENST00000411798 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
AL356479.1-203ENST00000411798 POLA2Q14181 598 aa15.04■□□□□ -0
AL356479.1-203ENST00000411798 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
AL356479.1-203ENST00000411798 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
AL356479.1-203ENST00000411798 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
AL356479.1-203ENST00000411798 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
AL356479.1-203ENST00000411798 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
AL356479.1-203ENST00000411798 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
AL356479.1-203ENST00000411798 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
AL356479.1-203ENST00000411798 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
AL356479.1-203ENST00000411798 ZBTB22O15209 634 aa14.79□□□□□ -0.04
AL356479.1-203ENST00000411798 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
AL356479.1-203ENST00000411798 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
AL356479.1-203ENST00000411798 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
AL356479.1-203ENST00000411798 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
AL356479.1-203ENST00000411798 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
AL356479.1-203ENST00000411798 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
AL356479.1-203ENST00000411798 AKT1S1Q96B36 256 aa14.58□□□□□ -0.07
AL356479.1-203ENST00000411798 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
AL356479.1-203ENST00000411798 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
AL356479.1-203ENST00000411798 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
AL356479.1-203ENST00000411798 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
AL356479.1-203ENST00000411798 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
AL356479.1-203ENST00000411798 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
AL356479.1-203ENST00000411798 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
AL356479.1-203ENST00000411798 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
AL356479.1-203ENST00000411798 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
AL356479.1-203ENST00000411798 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
AL356479.1-203ENST00000411798 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
AL356479.1-203ENST00000411798 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
AL356479.1-203ENST00000411798 FBLN2P98095 1184 aa14.22□□□□□ -0.13
AL356479.1-203ENST00000411798 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
AL356479.1-203ENST00000411798 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
AL356479.1-203ENST00000411798 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
AL356479.1-203ENST00000411798 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
AL356479.1-203ENST00000411798 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
AL356479.1-203ENST00000411798 HAX1O00165 279 aa14.1□□□□□ -0.15
AL356479.1-203ENST00000411798 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
AL356479.1-203ENST00000411798 EVX2Q03828 476 aa14.04□□□□□ -0.16
AL356479.1-203ENST00000411798 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
AL356479.1-203ENST00000411798 CUX2O14529 1486 aa14.01□□□□□ -0.17
AL356479.1-203ENST00000411798 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
AL356479.1-203ENST00000411798 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
AL356479.1-203ENST00000411798 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
AL356479.1-203ENST00000411798 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
AL356479.1-203ENST00000411798 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
AL356479.1-203ENST00000411798 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
AL356479.1-203ENST00000411798 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
AL356479.1-203ENST00000411798 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
AL356479.1-203ENST00000411798 SMARCA2P51531 1590 aa13.89□□□□□ -0.19
AL356479.1-203ENST00000411798 NESP48681 1621 aa13.83□□□□□ -0.2
AL356479.1-203ENST00000411798 C19orf67A6NJJ6 358 aa13.8□□□□□ -0.2
AL356479.1-203ENST00000411798 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
AL356479.1-203ENST00000411798 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms