RNA–Protein interactions for RNA: ENST00000596787.1

VN1R88P-201, Transcript of vomeronasal 1 receptor 88 pseudogene, humanhuman

BASIC

Gene VN1R88P, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VN1R88P-201ENST00000596787 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
VN1R88P-201ENST00000596787 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
VN1R88P-201ENST00000596787 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
VN1R88P-201ENST00000596787 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
VN1R88P-201ENST00000596787 FOXD1Q16676 465 aa21.12■□□□□ 0.97
VN1R88P-201ENST00000596787 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
VN1R88P-201ENST00000596787 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
VN1R88P-201ENST00000596787 ADRA2BP18089 450 aa19.89■□□□□ 0.77
VN1R88P-201ENST00000596787 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
VN1R88P-201ENST00000596787 MSH5O43196 834 aa19.62■□□□□ 0.73
VN1R88P-201ENST00000596787 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
VN1R88P-201ENST00000596787 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
VN1R88P-201ENST00000596787 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
VN1R88P-201ENST00000596787 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
VN1R88P-201ENST00000596787 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
VN1R88P-201ENST00000596787 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
VN1R88P-201ENST00000596787 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.39
VN1R88P-201ENST00000596787 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
VN1R88P-201ENST00000596787 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
VN1R88P-201ENST00000596787 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
VN1R88P-201ENST00000596787 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
VN1R88P-201ENST00000596787 KCNA4P22459 653 aa17.05■□□□□ 0.32
VN1R88P-201ENST00000596787 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
VN1R88P-201ENST00000596787 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
VN1R88P-201ENST00000596787 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
VN1R88P-201ENST00000596787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
VN1R88P-201ENST00000596787 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
VN1R88P-201ENST00000596787 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
VN1R88P-201ENST00000596787 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
VN1R88P-201ENST00000596787 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
VN1R88P-201ENST00000596787 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
VN1R88P-201ENST00000596787 CAPN15O75808 1086 aa15.92■□□□□ 0.14
VN1R88P-201ENST00000596787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
VN1R88P-201ENST00000596787 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
VN1R88P-201ENST00000596787 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
VN1R88P-201ENST00000596787 DSG3P32926 999 aa15.81■□□□□ 0.12
VN1R88P-201ENST00000596787 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
VN1R88P-201ENST00000596787 APLP2Q06481 763 aa15.8■□□□□ 0.12
VN1R88P-201ENST00000596787 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
VN1R88P-201ENST00000596787 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
VN1R88P-201ENST00000596787 ZBTB22O15209 634 aa15.71■□□□□ 0.11
VN1R88P-201ENST00000596787 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
VN1R88P-201ENST00000596787 ABCB7O75027 752 aa15.6■□□□□ 0.09
VN1R88P-201ENST00000596787 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
VN1R88P-201ENST00000596787 POLA2Q14181 598 aa15.38■□□□□ 0.05
VN1R88P-201ENST00000596787 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
VN1R88P-201ENST00000596787 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
VN1R88P-201ENST00000596787 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
VN1R88P-201ENST00000596787 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
VN1R88P-201ENST00000596787 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
VN1R88P-201ENST00000596787 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
VN1R88P-201ENST00000596787 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
VN1R88P-201ENST00000596787 FBLN2P98095 1184 aa14.79□□□□□ -0.04
VN1R88P-201ENST00000596787 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
VN1R88P-201ENST00000596787 POTEHQ6S545 545 aa14.74□□□□□ -0.05
VN1R88P-201ENST00000596787 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
VN1R88P-201ENST00000596787 REM2Q8IYK8 340 aaPredicted RBP14.64□□□□□ -0.07
VN1R88P-201ENST00000596787 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
VN1R88P-201ENST00000596787 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
VN1R88P-201ENST00000596787 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
VN1R88P-201ENST00000596787 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
VN1R88P-201ENST00000596787 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
VN1R88P-201ENST00000596787 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
VN1R88P-201ENST00000596787 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
VN1R88P-201ENST00000596787 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
VN1R88P-201ENST00000596787 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
VN1R88P-201ENST00000596787 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
VN1R88P-201ENST00000596787 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
VN1R88P-201ENST00000596787 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
VN1R88P-201ENST00000596787 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
VN1R88P-201ENST00000596787 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
VN1R88P-201ENST00000596787 CHADLQ6NUI6 762 aa14□□□□□ -0.17
VN1R88P-201ENST00000596787 HAX1O00165 279 aa13.98□□□□□ -0.17
VN1R88P-201ENST00000596787 PROM2Q8N271 834 aa13.93□□□□□ -0.18
VN1R88P-201ENST00000596787 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
VN1R88P-201ENST00000596787 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
VN1R88P-201ENST00000596787 EVX2Q03828 476 aa13.9□□□□□ -0.18
VN1R88P-201ENST00000596787 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
VN1R88P-201ENST00000596787 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
VN1R88P-201ENST00000596787 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
VN1R88P-201ENST00000596787 FKBP8Q14318 412 aa13.72□□□□□ -0.21
VN1R88P-201ENST00000596787 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
VN1R88P-201ENST00000596787 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
VN1R88P-201ENST00000596787 GABBR2O75899 941 aa13.56□□□□□ -0.24
VN1R88P-201ENST00000596787 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
VN1R88P-201ENST00000596787 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
VN1R88P-201ENST00000596787 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
VN1R88P-201ENST00000596787 MIER1Q8N108 512 aa13.47□□□□□ -0.25
VN1R88P-201ENST00000596787 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
VN1R88P-201ENST00000596787 CLCN6P51797 869 aa13.4□□□□□ -0.26
VN1R88P-201ENST00000596787 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
VN1R88P-201ENST00000596787 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
VN1R88P-201ENST00000596787 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
VN1R88P-201ENST00000596787 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
VN1R88P-201ENST00000596787 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
VN1R88P-201ENST00000596787 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
VN1R88P-201ENST00000596787 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
VN1R88P-201ENST00000596787 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
VN1R88P-201ENST00000596787 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
VN1R88P-201ENST00000596787 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms