Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAF4Q9BUZ4 AC090164.3-201ENST00000610780 2143 ntBASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 AC104581.1-202ENST00000635932 2618 ntBASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 MIR1224-201ENST00000408193 85 ntBASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 KRT18P21-201ENST00000515767 1272 ntBASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRAF4Q9BUZ4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 MMP23A-201ENST00000234610 1017 ntBASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 NUDT16P1-203ENST00000513809 620 ntBASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF4Q9BUZ4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.3
TRAF4Q9BUZ4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF4Q9BUZ4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms