Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NUDT16P1-203ENST00000513809 620 ntBASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 DGCR10-201ENST00000609839 495 ntBASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 WIZP1-201ENST00000531444 2299 ntBASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDLIM5Q96HC4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 AC096733.2-201ENST00000609937 1394 ntBASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.5■□□□□ 0.55
PDLIM5Q96HC4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
PDLIM5Q96HC4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 AC113410.3-201ENST00000623366 203 ntBASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 AL049637.2-201ENST00000641778 930 ntBASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDLIM5Q96HC4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms