Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 C1QL1P1-201ENST00000568105 661 ntBASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.99■□□□□ 0.63
SLC44A1Q8WWI5 HEIH-201ENST00000623091 1652 ntBASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SLC44A1Q8WWI5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 AIRN-201ENST00000601203 4374 ntBASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SLC44A1Q8WWI5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 KRT8P41-201ENST00000533985 1514 ntBASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms