Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RDH11Q8TC12 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RDH11Q8TC12 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RDH11Q8TC12 HEIH-201ENST00000623091 1652 ntBASIC18.63■□□□□ 0.57
RDH11Q8TC12 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.63■□□□□ 0.57
RDH11Q8TC12 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 AC142086.2-201ENST00000569753 217 ntBASIC18.63■□□□□ 0.57
RDH11Q8TC12 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RDH11Q8TC12 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RDH11Q8TC12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 UNC93B4-201ENST00000505679 747 ntBASIC18.62■□□□□ 0.57
RDH11Q8TC12 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RDH11Q8TC12 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RDH11Q8TC12 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 POM121L13P-201ENST00000422362 380 ntBASIC18.61■□□□□ 0.57
RDH11Q8TC12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 AC069152.1-201ENST00000438030 544 ntBASIC18.61■□□□□ 0.57
RDH11Q8TC12 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RDH11Q8TC12 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.61■□□□□ 0.57
RDH11Q8TC12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms