Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIPK4Q8NE63 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIPK4Q8NE63 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 AL512625.2-201ENST00000417533 625 ntBASIC18.36■□□□□ 0.53
HIPK4Q8NE63 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 RARRES2P6-201ENST00000567333 442 ntBASIC18.36■□□□□ 0.53
HIPK4Q8NE63 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIPK4Q8NE63 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 KRT17P1-201ENST00000399211 1546 ntBASIC18.35■□□□□ 0.53
HIPK4Q8NE63 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 AC026271.2-201ENST00000428091 497 ntBASIC18.35■□□□□ 0.53
HIPK4Q8NE63 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIPK4Q8NE63 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms