Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PSD4Q8NDX1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PSD4Q8NDX1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.84■□□□□ 0.45
PSD4Q8NDX1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 AC131212.4-201ENST00000623606 975 ntBASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.84■□□□□ 0.45
PSD4Q8NDX1 HLA-A-209ENST00000638375 975 ntBASIC17.84■□□□□ 0.45
PSD4Q8NDX1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PSD4Q8NDX1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.83■□□□□ 0.45
PSD4Q8NDX1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PSD4Q8NDX1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 MMP23A-201ENST00000234610 1017 ntBASIC17.83■□□□□ 0.44
PSD4Q8NDX1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 AC004980.1-204ENST00000429707 299 ntBASIC17.83■□□□□ 0.44
PSD4Q8NDX1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.44
PSD4Q8NDX1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PSD4Q8NDX1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 AP000525.1-201ENST00000608286 694 ntBASIC17.82■□□□□ 0.44
PSD4Q8NDX1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 AL049812.1-201ENST00000432563 2267 ntBASIC17.82■□□□□ 0.44
PSD4Q8NDX1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSD4Q8NDX1 AC079598.2-202ENST00000546624 1451 ntBASIC17.82■□□□□ 0.44
PSD4Q8NDX1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSD4Q8NDX1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms