Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.33■□□□□ 0.37
LSMEM1Q8N8F7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 PRSS44-201ENST00000515154 1146 ntBASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 RARRES2P10-201ENST00000564312 460 ntBASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LSMEM1Q8N8F7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 AL356309.3-201ENST00000624132 1934 ntBASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 AC026271.3-201ENST00000571884 352 ntBASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSMEM1Q8N8F7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 KRT8P11-201ENST00000409686 1436 ntBASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 RPS2P4-201ENST00000476944 856 ntBASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 ITM2C-210ENST00000620962 501 ntBASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LSMEM1Q8N8F7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 KRT16P1-201ENST00000399124 1418 ntBASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 FAM201B-201ENST00000458407 597 ntBASIC17.3■□□□□ 0.36
LSMEM1Q8N8F7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms