Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM42Q8IWZ5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 AL512625.2-201ENST00000417533 625 ntBASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 HLA-L-209ENST00000420110 1011 ntBASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 AC073592.3-201ENST00000625118 1834 ntBASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM42Q8IWZ5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 LSM12P1-201ENST00000411836 588 ntBASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 NCF1B-203ENST00000435988 1254 ntBASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 YBX1P10-201ENST00000444752 975 ntBASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 AL050303.2-201ENST00000619798 666 ntBASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM42Q8IWZ5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM42Q8IWZ5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms