Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.07■□□□□ 0.32
RTL6Q6ICC9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 PRSS44-201ENST00000515154 1146 ntBASIC17.07■□□□□ 0.32
RTL6Q6ICC9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 AC104417.2-201ENST00000562989 1793 ntBASIC17.07■□□□□ 0.32
RTL6Q6ICC9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.07■□□□□ 0.32
RTL6Q6ICC9 AC116562.4-201ENST00000641316 2276 ntBASIC17.07■□□□□ 0.32
RTL6Q6ICC9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 AL031133.1-201ENST00000406807 723 ntBASIC17.06■□□□□ 0.32
RTL6Q6ICC9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 AL512604.3-201ENST00000569583 964 ntBASIC17.06■□□□□ 0.32
RTL6Q6ICC9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL6Q6ICC9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 KRT8P45-201ENST00000414328 1447 ntBASIC17.05■□□□□ 0.32
RTL6Q6ICC9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL6Q6ICC9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RTL6Q6ICC9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL6Q6ICC9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL6Q6ICC9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms