Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 HLA-A-209ENST00000638375 975 ntBASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 ABALON-201ENST00000629058 1903 ntBASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 AC126763.1-201ENST00000552015 2118 ntBASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.88■□□□□ 0.45
RUNDC3AQ59EK9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 AC092666.2-201ENST00000613287 246 ntBASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RUNDC3AQ59EK9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.86■□□□□ 0.45
RUNDC3AQ59EK9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms