Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.87■□□□□ 0.45
TRA2BP62995 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRA2BP62995 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.87■□□□□ 0.45
TRA2BP62995 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
TRA2BP62995 Z99916.2-201ENST00000604037 246 ntBASIC17.87■□□□□ 0.45
TRA2BP62995 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.87■□□□□ 0.45
TRA2BP62995 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.87■□□□□ 0.45
TRA2BP62995 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRA2BP62995 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRA2BP62995 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRA2BP62995 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
TRA2BP62995 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 AC008550.1-201ENST00000511500 884 ntBASIC17.86■□□□□ 0.45
TRA2BP62995 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.86■□□□□ 0.45
TRA2BP62995 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.86■□□□□ 0.45
TRA2BP62995 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.86■□□□□ 0.45
TRA2BP62995 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.86■□□□□ 0.45
TRA2BP62995 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.86■□□□□ 0.45
TRA2BP62995 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.86■□□□□ 0.45
TRA2BP62995 AC026471.5-201ENST00000615068 467 ntBASIC17.86■□□□□ 0.45
TRA2BP62995 AP006294.2-201ENST00000641667 209 ntBASIC17.86■□□□□ 0.45
TRA2BP62995 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.86■□□□□ 0.45
TRA2BP62995 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.86■□□□□ 0.45
TRA2BP62995 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.86■□□□□ 0.45
TRA2BP62995 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.86■□□□□ 0.45
TRA2BP62995 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRA2BP62995 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.86■□□□□ 0.45
TRA2BP62995 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRA2BP62995 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.85■□□□□ 0.45
TRA2BP62995 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRA2BP62995 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.85■□□□□ 0.45
TRA2BP62995 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.85■□□□□ 0.45
TRA2BP62995 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.85■□□□□ 0.45
TRA2BP62995 CA15P1-201ENST00000481698 905 ntBASIC17.85■□□□□ 0.45
TRA2BP62995 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.85■□□□□ 0.45
TRA2BP62995 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.85■□□□□ 0.45
TRA2BP62995 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.85■□□□□ 0.45
TRA2BP62995 ANO7L1-203ENST00000602586 1720 ntBASIC17.85■□□□□ 0.45
TRA2BP62995 REXO1L10P-201ENST00000615707 1290 ntBASIC17.85■□□□□ 0.45
TRA2BP62995 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRA2BP62995 REXO1L12P-201ENST00000622156 912 ntBASIC17.85■□□□□ 0.45
TRA2BP62995 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRA2BP62995 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRA2BP62995 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.84■□□□□ 0.45
TRA2BP62995 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRA2BP62995 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRA2BP62995 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
TRA2BP62995 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.84■□□□□ 0.45
TRA2BP62995 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.84■□□□□ 0.45
TRA2BP62995 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.84■□□□□ 0.45
TRA2BP62995 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRA2BP62995 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms