Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCE1P61221 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCE1P61221 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCE1P61221 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
ABCE1P61221 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCE1P61221 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCE1P61221 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 MIPEPP3-201ENST00000412105 444 ntBASIC18.64■□□□□ 0.57
ABCE1P61221 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ABCE1P61221 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCE1P61221 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ABCE1P61221 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.64■□□□□ 0.57
ABCE1P61221 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ABCE1P61221 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCE1P61221 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCE1P61221 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCE1P61221 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCE1P61221 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCE1P61221 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ABCE1P61221 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ABCE1P61221 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCE1P61221 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.63■□□□□ 0.57
ABCE1P61221 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 AL162430.1-201ENST00000480705 870 ntBASIC18.63■□□□□ 0.57
ABCE1P61221 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.63■□□□□ 0.57
ABCE1P61221 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ABCE1P61221 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCE1P61221 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCE1P61221 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.63■□□□□ 0.57
ABCE1P61221 AC073111.5-205ENST00000641717 521 ntBASIC18.63■□□□□ 0.57
ABCE1P61221 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ABCE1P61221 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCE1P61221 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCE1P61221 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 AC126763.1-201ENST00000552015 2118 ntBASIC18.62■□□□□ 0.57
ABCE1P61221 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCE1P61221 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCE1P61221 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.62■□□□□ 0.57
ABCE1P61221 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.62■□□□□ 0.57
ABCE1P61221 AC022517.1-201ENST00000592429 346 ntBASIC18.62■□□□□ 0.57
ABCE1P61221 AC080038.1-201ENST00000611274 1154 ntBASIC18.62■□□□□ 0.57
ABCE1P61221 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ABCE1P61221 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.62■□□□□ 0.57
ABCE1P61221 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ABCE1P61221 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
ABCE1P61221 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ABCE1P61221 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCE1P61221 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCE1P61221 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ABCE1P61221 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCE1P61221 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCE1P61221 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.61■□□□□ 0.57
ABCE1P61221 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ABCE1P61221 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.61■□□□□ 0.57
ABCE1P61221 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ABCE1P61221 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.61■□□□□ 0.57
ABCE1P61221 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ABCE1P61221 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms