Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 HMGA1P5-201ENST00000412453 271 ntBASIC20.05■□□□□ 0.8
CACNA2D1P54289 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.05■□□□□ 0.8
CACNA2D1P54289 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CACNA2D1P54289 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 AC141586.3-201ENST00000562166 1838 ntBASIC20.04■□□□□ 0.8
CACNA2D1P54289 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 IRX1P1-201ENST00000438849 1838 ntBASIC20.04■□□□□ 0.8
CACNA2D1P54289 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CACNA2D1P54289 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNA2D1P54289 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 AC104076.2-201ENST00000448912 469 ntBASIC20.03■□□□□ 0.8
CACNA2D1P54289 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 AC006011.2-201ENST00000621313 1158 ntBASIC20.03■□□□□ 0.8
CACNA2D1P54289 AL138966.2-201ENST00000621997 464 ntBASIC20.03■□□□□ 0.8
CACNA2D1P54289 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA2D1P54289 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA2D1P54289 KRT8P45-201ENST00000414328 1447 ntBASIC20.02■□□□□ 0.8
CACNA2D1P54289 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 MIR1224-201ENST00000408193 85 ntBASIC20.02■□□□□ 0.8
CACNA2D1P54289 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 AC010331.1-201ENST00000611423 582 ntBASIC20.02■□□□□ 0.8
CACNA2D1P54289 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA2D1P54289 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA2D1P54289 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CACNA2D1P54289 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CACNA2D1P54289 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
CACNA2D1P54289 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms