Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.54■□□□□ 0.72
PMS2P54278 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PMS2P54278 ESRRAP1-201ENST00000400596 1257 ntBASIC19.54■□□□□ 0.72
PMS2P54278 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS2P54278 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PMS2P54278 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.54■□□□□ 0.72
PMS2P54278 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.54■□□□□ 0.72
PMS2P54278 AC091874.3-201ENST00000512672 1195 ntBASIC19.54■□□□□ 0.72
PMS2P54278 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.54■□□□□ 0.72
PMS2P54278 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.54■□□□□ 0.72
PMS2P54278 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
PMS2P54278 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PMS2P54278 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.53■□□□□ 0.72
PMS2P54278 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 DUSP5P2-201ENST00000426873 1033 ntBASIC19.53■□□□□ 0.72
PMS2P54278 AC098590.1-201ENST00000468126 897 ntBASIC19.53■□□□□ 0.72
PMS2P54278 RPS2P52-201ENST00000469610 820 ntBASIC19.53■□□□□ 0.72
PMS2P54278 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.53■□□□□ 0.72
PMS2P54278 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PMS2P54278 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.53■□□□□ 0.72
PMS2P54278 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.53■□□□□ 0.72
PMS2P54278 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PMS2P54278 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
PMS2P54278 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.52■□□□□ 0.72
PMS2P54278 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PMS2P54278 AC020916.1-201ENST00000587762 1774 ntBASIC19.52■□□□□ 0.72
PMS2P54278 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
PMS2P54278 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS2P54278 KRT8P8-201ENST00000434750 1448 ntBASIC19.52■□□□□ 0.72
PMS2P54278 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS2P54278 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS2P54278 AP006294.2-201ENST00000641667 209 ntBASIC19.52■□□□□ 0.72
PMS2P54278 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.52■□□□□ 0.72
PMS2P54278 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.52■□□□□ 0.72
PMS2P54278 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PMS2P54278 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PMS2P54278 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
PMS2P54278 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PMS2P54278 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.51■□□□□ 0.71
PMS2P54278 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 AC090340.1-201ENST00000620778 4980 ntBASIC19.51■□□□□ 0.71
PMS2P54278 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PMS2P54278 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 AC067852.2-201ENST00000590513 2313 ntBASIC19.51■□□□□ 0.71
PMS2P54278 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.51■□□□□ 0.71
PMS2P54278 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 GCSHP5-201ENST00000443090 522 ntBASIC19.51■□□□□ 0.71
PMS2P54278 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
PMS2P54278 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.51■□□□□ 0.71
PMS2P54278 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PMS2P54278 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PMS2P54278 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms