Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHAP40939 AC012618.2-201ENST00000428058 849 ntBASIC19.16■□□□□ 0.66
HADHAP40939 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.16■□□□□ 0.66
HADHAP40939 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HADHAP40939 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HADHAP40939 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
HADHAP40939 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 AC020763.4-201ENST00000623414 4170 ntBASIC19.15■□□□□ 0.66
HADHAP40939 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HADHAP40939 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
HADHAP40939 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 Z98044.1-201ENST00000632503 1764 ntBASIC19.15■□□□□ 0.66
HADHAP40939 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 RPS2P55-201ENST00000397318 883 ntBASIC19.15■□□□□ 0.66
HADHAP40939 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 AC107956.1-201ENST00000494359 873 ntBASIC19.15■□□□□ 0.66
HADHAP40939 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.15■□□□□ 0.66
HADHAP40939 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HADHAP40939 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HADHAP40939 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HADHAP40939 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HADHAP40939 KRT8P41-201ENST00000533985 1514 ntBASIC19.15■□□□□ 0.66
HADHAP40939 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HADHAP40939 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
HADHAP40939 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.14■□□□□ 0.65
HADHAP40939 AC233702.5-201ENST00000584107 538 ntBASIC19.14■□□□□ 0.65
HADHAP40939 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.14■□□□□ 0.65
HADHAP40939 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.14■□□□□ 0.65
HADHAP40939 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HADHAP40939 FEM1AP3-201ENST00000403722 1741 ntBASIC19.14■□□□□ 0.65
HADHAP40939 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.14■□□□□ 0.65
HADHAP40939 AL031598.1-201ENST00000561511 1773 ntBASIC19.14■□□□□ 0.65
HADHAP40939 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HADHAP40939 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.14■□□□□ 0.65
HADHAP40939 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
HADHAP40939 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HADHAP40939 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 CD177P1-201ENST00000606252 935 ntBASIC19.13■□□□□ 0.65
HADHAP40939 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HADHAP40939 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.13■□□□□ 0.65
HADHAP40939 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HADHAP40939 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HADHAP40939 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms