Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LCN1P31025 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.53■□□□□ 0.4
LCN1P31025 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.53■□□□□ 0.4
LCN1P31025 AC011506.1-201ENST00000474329 610 ntBASIC17.53■□□□□ 0.4
LCN1P31025 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.53■□□□□ 0.4
LCN1P31025 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
LCN1P31025 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.53■□□□□ 0.4
LCN1P31025 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.53■□□□□ 0.4
LCN1P31025 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.53■□□□□ 0.4
LCN1P31025 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LCN1P31025 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCN1P31025 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.53■□□□□ 0.4
LCN1P31025 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.52■□□□□ 0.4
LCN1P31025 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LCN1P31025 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.52■□□□□ 0.4
LCN1P31025 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LCN1P31025 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 MESTP1-201ENST00000404287 994 ntBASIC17.52■□□□□ 0.4
LCN1P31025 AL355355.2-201ENST00000442321 338 ntBASIC17.52■□□□□ 0.4
LCN1P31025 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.52■□□□□ 0.4
LCN1P31025 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.52■□□□□ 0.4
LCN1P31025 CKBP1-201ENST00000565489 1086 ntBASIC17.52■□□□□ 0.4
LCN1P31025 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.52■□□□□ 0.4
LCN1P31025 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.52■□□□□ 0.4
LCN1P31025 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.52■□□□□ 0.4
LCN1P31025 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCN1P31025 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.52■□□□□ 0.39
LCN1P31025 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
LCN1P31025 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 AL161938.1-201ENST00000569833 2180 ntBASIC17.52■□□□□ 0.39
LCN1P31025 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCN1P31025 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 MIR4785-201ENST00000585005 73 ntBASIC17.51■□□□□ 0.39
LCN1P31025 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.51■□□□□ 0.39
LCN1P31025 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.51■□□□□ 0.39
LCN1P31025 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 AC026471.5-201ENST00000615068 467 ntBASIC17.51■□□□□ 0.39
LCN1P31025 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LCN1P31025 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 AC096733.2-201ENST00000609937 1394 ntBASIC17.51■□□□□ 0.39
LCN1P31025 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LCN1P31025 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCN1P31025 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms