Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.56■□□□□ 0.4
NR4A1P22736 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.56■□□□□ 0.4
NR4A1P22736 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NR4A1P22736 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NR4A1P22736 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NR4A1P22736 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.56■□□□□ 0.4
NR4A1P22736 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 AL031598.1-201ENST00000561511 1773 ntBASIC17.56■□□□□ 0.4
NR4A1P22736 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR4A1P22736 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NR4A1P22736 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.55■□□□□ 0.4
NR4A1P22736 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.55■□□□□ 0.4
NR4A1P22736 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.55■□□□□ 0.4
NR4A1P22736 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NR4A1P22736 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.55■□□□□ 0.4
NR4A1P22736 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NR4A1P22736 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 AL139384.1-201ENST00000612143 3047 ntBASIC17.55■□□□□ 0.4
NR4A1P22736 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR4A1P22736 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.55■□□□□ 0.4
NR4A1P22736 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
NR4A1P22736 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
NR4A1P22736 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR4A1P22736 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
NR4A1P22736 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.54■□□□□ 0.4
NR4A1P22736 CD99P1-205ENST00000527459 561 ntBASIC17.54■□□□□ 0.4
NR4A1P22736 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.54■□□□□ 0.4
NR4A1P22736 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.54■□□□□ 0.4
NR4A1P22736 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NR4A1P22736 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.54■□□□□ 0.4
NR4A1P22736 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NR4A1P22736 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NR4A1P22736 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR4A1P22736 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NR4A1P22736 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
NR4A1P22736 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
NR4A1P22736 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 C2orf69P4-201ENST00000565394 541 ntBASIC17.53■□□□□ 0.4
NR4A1P22736 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.53■□□□□ 0.4
NR4A1P22736 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.53■□□□□ 0.4
NR4A1P22736 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NR4A1P22736 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
NR4A1P22736 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR4A1P22736 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
NR4A1P22736 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NR4A1P22736 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NR4A1P22736 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR4A1P22736 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.52■□□□□ 0.4
NR4A1P22736 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms