Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX1P22670 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.61■□□□□ 0.89
RFX1P22670 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX1P22670 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RFX1P22670 AL138781.2-201ENST00000617896 1843 ntBASIC20.6■□□□□ 0.89
RFX1P22670 AC093525.10-201ENST00000625130 1569 ntBASIC20.6■□□□□ 0.89
RFX1P22670 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.6■□□□□ 0.89
RFX1P22670 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFX1P22670 TERF1P1-201ENST00000311003 1181 ntBASIC20.6■□□□□ 0.89
RFX1P22670 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RFX1P22670 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.6■□□□□ 0.89
RFX1P22670 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.6■□□□□ 0.89
RFX1P22670 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX1P22670 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.6■□□□□ 0.89
RFX1P22670 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX1P22670 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RFX1P22670 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX1P22670 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFX1P22670 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFX1P22670 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX1P22670 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 AL390955.1-201ENST00000428694 934 ntBASIC20.59■□□□□ 0.89
RFX1P22670 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX1P22670 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.59■□□□□ 0.89
RFX1P22670 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX1P22670 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.59■□□□□ 0.89
RFX1P22670 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX1P22670 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RFX1P22670 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RFX1P22670 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.59■□□□□ 0.89
RFX1P22670 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX1P22670 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RFX1P22670 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RFX1P22670 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RFX1P22670 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX1P22670 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX1P22670 SLC25A3P1-201ENST00000443844 931 ntBASIC20.58■□□□□ 0.89
RFX1P22670 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.58■□□□□ 0.89
RFX1P22670 DUX4L26-201ENST00000489078 1255 ntBASIC20.58■□□□□ 0.89
RFX1P22670 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.58■□□□□ 0.89
RFX1P22670 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.58■□□□□ 0.89
RFX1P22670 AL445675.2-201ENST00000620291 557 ntBASIC20.58■□□□□ 0.89
RFX1P22670 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX1P22670 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX1P22670 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX1P22670 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX1P22670 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX1P22670 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.58■□□□□ 0.88
RFX1P22670 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX1P22670 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX1P22670 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.57■□□□□ 0.88
RFX1P22670 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFX1P22670 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.57■□□□□ 0.88
RFX1P22670 CR392000.1-201ENST00000624770 1228 ntBASIC20.57■□□□□ 0.88
RFX1P22670 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.57■□□□□ 0.88
RFX1P22670 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFX1P22670 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms