Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
LAMP1P11279 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LAMP1P11279 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
LAMP1P11279 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.94■□□□□ 0.46
LAMP1P11279 POU5F1P3-201ENST00000428824 1078 ntBASIC17.94■□□□□ 0.46
LAMP1P11279 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.94■□□□□ 0.46
LAMP1P11279 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.94■□□□□ 0.46
LAMP1P11279 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.94■□□□□ 0.46
LAMP1P11279 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LAMP1P11279 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.94■□□□□ 0.46
LAMP1P11279 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LAMP1P11279 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.93■□□□□ 0.46
LAMP1P11279 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.93■□□□□ 0.46
LAMP1P11279 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.93■□□□□ 0.46
LAMP1P11279 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.93■□□□□ 0.46
LAMP1P11279 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LAMP1P11279 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LAMP1P11279 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.92■□□□□ 0.46
LAMP1P11279 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 KRT8P11-201ENST00000409686 1436 ntBASIC17.92■□□□□ 0.46
LAMP1P11279 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.92■□□□□ 0.46
LAMP1P11279 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LAMP1P11279 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 NIFKP9-201ENST00000419265 221 ntBASIC17.92■□□□□ 0.46
LAMP1P11279 AC004980.1-204ENST00000429707 299 ntBASIC17.92■□□□□ 0.46
LAMP1P11279 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 AC128676.1-201ENST00000454392 318 ntBASIC17.92■□□□□ 0.46
LAMP1P11279 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LAMP1P11279 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms