Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.01□□□□□ -0.01
PF4V1P10720 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 EGLN1P1-201ENST00000531623 762 ntBASIC15.01□□□□□ -0.01
PF4V1P10720 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PF4V1P10720 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15□□□□□ -0.01
PF4V1P10720 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 SDHAP1-207ENST00000440850 2000 ntBASIC15□□□□□ -0.01
PF4V1P10720 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15□□□□□ -0.01
PF4V1P10720 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15□□□□□ -0.01
PF4V1P10720 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 AC091390.4-202ENST00000476426 537 ntBASIC15□□□□□ -0.01
PF4V1P10720 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15□□□□□ -0.01
PF4V1P10720 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 SLC25A24-204ENST00000569674 2357 ntBASIC15□□□□□ -0.01
PF4V1P10720 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PF4V1P10720 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PF4V1P10720 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15□□□□□ -0.01
PF4V1P10720 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.99□□□□□ -0.01
PF4V1P10720 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.99□□□□□ -0.01
PF4V1P10720 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.99□□□□□ -0.01
PF4V1P10720 MESTP1-201ENST00000404287 994 ntBASIC14.99□□□□□ -0.01
PF4V1P10720 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PF4V1P10720 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.99□□□□□ -0.01
PF4V1P10720 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.99□□□□□ -0.01
PF4V1P10720 AC130371.2-201ENST00000619443 611 ntBASIC14.99□□□□□ -0.01
PF4V1P10720 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
PF4V1P10720 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PF4V1P10720 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
PF4V1P10720 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PF4V1P10720 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PF4V1P10720 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PF4V1P10720 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PF4V1P10720 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms