Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SCAF4O95104 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 PKD1P5-201ENST00000532415 10291 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 CROCCP1-201ENST00000426910 5675 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 ID1-201ENST00000376105 1233 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 SLC29A4P1-201ENST00000398760 971 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 NCF1B-203ENST00000435988 1254 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 AC093787.1-201ENST00000450396 207 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.5■□□□□ 0.07
SCAF4O95104 OR10C1-204ENST00000622521 1039 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SCAF4O95104 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SCAF4O95104 WIZP1-201ENST00000531444 2299 ntBASIC15.5■□□□□ 0.07
SCAF4O95104 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SCAF4O95104 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 MKRN4P-201ENST00000444706 1521 ntBASIC15.49■□□□□ 0.07
SCAF4O95104 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.49■□□□□ 0.07
SCAF4O95104 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 AC133552.2-202ENST00000575694 574 ntBASIC15.49■□□□□ 0.07
SCAF4O95104 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SCAF4O95104 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.49■□□□□ 0.07
SCAF4O95104 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SCAF4O95104 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 FER1L4-210ENST00000615531 5998 ntBASIC15.49■□□□□ 0.07
SCAF4O95104 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SCAF4O95104 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SCAF4O95104 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCAF4O95104 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SCAF4O95104 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.48■□□□□ 0.07
SCAF4O95104 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SCAF4O95104 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.48■□□□□ 0.07
SCAF4O95104 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SCAF4O95104 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SCAF4O95104 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms