Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP1O94782 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 KRASP1-201ENST00000407852 552 ntBASIC19.15■□□□□ 0.66
USP1O94782 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.15■□□□□ 0.66
USP1O94782 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.15■□□□□ 0.66
USP1O94782 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.15■□□□□ 0.66
USP1O94782 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.15■□□□□ 0.66
USP1O94782 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 ITM2C-210ENST00000620962 501 ntBASIC19.15■□□□□ 0.66
USP1O94782 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.15■□□□□ 0.66
USP1O94782 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.15■□□□□ 0.66
USP1O94782 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
USP1O94782 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.15■□□□□ 0.66
USP1O94782 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP1O94782 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP1O94782 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.14■□□□□ 0.66
USP1O94782 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
USP1O94782 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP1O94782 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP1O94782 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
USP1O94782 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.14■□□□□ 0.65
USP1O94782 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 KRT18P29-201ENST00000397031 1267 ntBASIC19.14■□□□□ 0.65
USP1O94782 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USP1O94782 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP1O94782 AC133681.1-201ENST00000465482 601 ntBASIC19.14■□□□□ 0.65
USP1O94782 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.14■□□□□ 0.65
USP1O94782 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.14■□□□□ 0.65
USP1O94782 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP1O94782 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.14■□□□□ 0.65
USP1O94782 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.14■□□□□ 0.65
USP1O94782 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP1O94782 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP1O94782 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.14■□□□□ 0.65
USP1O94782 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.13■□□□□ 0.65
USP1O94782 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 AC124016.1-201ENST00000609552 612 ntBASIC19.13■□□□□ 0.65
USP1O94782 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.13■□□□□ 0.65
USP1O94782 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
USP1O94782 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP1O94782 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP1O94782 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
USP1O94782 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
USP1O94782 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.12■□□□□ 0.65
USP1O94782 WIZP1-201ENST00000531444 2299 ntBASIC19.12■□□□□ 0.65
USP1O94782 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms