Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN1O60925 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN1O60925 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PFDN1O60925 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PFDN1O60925 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN1O60925 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN1O60925 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN1O60925 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PFDN1O60925 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PFDN1O60925 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN1O60925 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN1O60925 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.97■□□□□ 0.31
PFDN1O60925 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 DOC2GP-204ENST00000639052 2548 ntBASIC16.97■□□□□ 0.31
PFDN1O60925 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PFDN1O60925 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
PFDN1O60925 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.97■□□□□ 0.31
PFDN1O60925 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 AL031602.1-201ENST00000633169 911 ntBASIC16.97■□□□□ 0.31
PFDN1O60925 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.97■□□□□ 0.31
PFDN1O60925 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PFDN1O60925 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN1O60925 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PFDN1O60925 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.96■□□□□ 0.31
PFDN1O60925 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.96■□□□□ 0.31
PFDN1O60925 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PFDN1O60925 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PFDN1O60925 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PFDN1O60925 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PFDN1O60925 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PFDN1O60925 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PFDN1O60925 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 AC126755.1-201ENST00000525846 6405 ntBASIC16.95■□□□□ 0.3
PFDN1O60925 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PFDN1O60925 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms