Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.64□□□□□ -0.39
EIF4EBP3O60516 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EIF4EBP3O60516 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EIF4EBP3O60516 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 YBX1P1-201ENST00000445822 960 ntBASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 AF213884.3-201ENST00000563833 479 ntBASIC12.63□□□□□ -0.39
EIF4EBP3O60516 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
EIF4EBP3O60516 AL162727.3-201ENST00000635661 2787 ntBASIC12.63□□□□□ -0.39
EIF4EBP3O60516 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 HLA-G-202ENST00000376815 851 ntBASIC12.62□□□□□ -0.39
EIF4EBP3O60516 HLA-G-203ENST00000376818 1127 ntBASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 MIR939-201ENST00000401314 82 ntBASIC12.62□□□□□ -0.39
EIF4EBP3O60516 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.62□□□□□ -0.39
EIF4EBP3O60516 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.61□□□□□ -0.39
EIF4EBP3O60516 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.61□□□□□ -0.39
EIF4EBP3O60516 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EIF4EBP3O60516 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EIF4EBP3O60516 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EIF4EBP3O60516 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms