Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK2O43353 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
RIPK2O43353 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK2O43353 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RIPK2O43353 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RIPK2O43353 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.24■□□□□ 0.67
RIPK2O43353 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK2O43353 AC004911.1-201ENST00000416316 871 ntBASIC19.24■□□□□ 0.67
RIPK2O43353 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK2O43353 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.24■□□□□ 0.67
RIPK2O43353 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.24■□□□□ 0.67
RIPK2O43353 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
RIPK2O43353 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIPK2O43353 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RIPK2O43353 ESPNP-201ENST00000270691 2015 ntBASIC19.24■□□□□ 0.67
RIPK2O43353 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK2O43353 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RIPK2O43353 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK2O43353 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK2O43353 AC105036.2-201ENST00000569468 176 ntBASIC19.23■□□□□ 0.67
RIPK2O43353 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.23■□□□□ 0.67
RIPK2O43353 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.23■□□□□ 0.67
RIPK2O43353 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RIPK2O43353 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK2O43353 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
RIPK2O43353 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIPK2O43353 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RIPK2O43353 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RIPK2O43353 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK2O43353 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RIPK2O43353 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.22■□□□□ 0.67
RIPK2O43353 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.22■□□□□ 0.67
RIPK2O43353 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
RIPK2O43353 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.22■□□□□ 0.67
RIPK2O43353 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.22■□□□□ 0.67
RIPK2O43353 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.22■□□□□ 0.67
RIPK2O43353 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RIPK2O43353 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RIPK2O43353 AL499627.1-201ENST00000569373 2188 ntBASIC19.22■□□□□ 0.67
RIPK2O43353 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIPK2O43353 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 HEIH-201ENST00000623091 1652 ntBASIC19.21■□□□□ 0.67
RIPK2O43353 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK2O43353 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK2O43353 TSPY23P-201ENST00000440136 739 ntBASIC19.21■□□□□ 0.67
RIPK2O43353 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK2O43353 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK2O43353 AF201337.1-201ENST00000520239 748 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms