Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
PHGDHO43175 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.85■□□□□ 0.61
PHGDHO43175 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.85■□□□□ 0.61
PHGDHO43175 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.85■□□□□ 0.61
PHGDHO43175 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.85■□□□□ 0.61
PHGDHO43175 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.85■□□□□ 0.61
PHGDHO43175 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.85■□□□□ 0.61
PHGDHO43175 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 ANO7L1-203ENST00000602586 1720 ntBASIC18.85■□□□□ 0.61
PHGDHO43175 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
PHGDHO43175 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.84■□□□□ 0.61
PHGDHO43175 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PHGDHO43175 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PHGDHO43175 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 AC239809.2-201ENST00000415381 517 ntBASIC18.84■□□□□ 0.61
PHGDHO43175 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.84■□□□□ 0.61
PHGDHO43175 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.84■□□□□ 0.61
PHGDHO43175 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.84■□□□□ 0.61
PHGDHO43175 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PHGDHO43175 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHGDHO43175 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.84■□□□□ 0.61
PHGDHO43175 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHGDHO43175 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHGDHO43175 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.83■□□□□ 0.61
PHGDHO43175 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PHGDHO43175 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHGDHO43175 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHGDHO43175 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PHGDHO43175 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.83■□□□□ 0.61
PHGDHO43175 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
PHGDHO43175 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.83■□□□□ 0.6
PHGDHO43175 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.83■□□□□ 0.6
PHGDHO43175 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PHGDHO43175 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PHGDHO43175 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PHGDHO43175 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.83■□□□□ 0.6
PHGDHO43175 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.6
PHGDHO43175 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
PHGDHO43175 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
PHGDHO43175 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHGDHO43175 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PHGDHO43175 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms