Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.44■□□□□ 0.38
TO15178 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
TO15178 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.44■□□□□ 0.38
TO15178 AC116562.4-202ENST00000641738 218 ntBASIC17.44■□□□□ 0.38
TO15178 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.44■□□□□ 0.38
TO15178 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.44■□□□□ 0.38
TO15178 AC092338.2-201ENST00000568827 1415 ntBASIC17.44■□□□□ 0.38
TO15178 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TO15178 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TO15178 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TO15178 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.43■□□□□ 0.38
TO15178 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TO15178 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.43■□□□□ 0.38
TO15178 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
TO15178 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TO15178 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.43■□□□□ 0.38
TO15178 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
TO15178 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.43■□□□□ 0.38
TO15178 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.43■□□□□ 0.38
TO15178 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TO15178 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TO15178 AC010653.2-201ENST00000623505 997 ntBASIC17.43■□□□□ 0.38
TO15178 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TO15178 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TO15178 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.43■□□□□ 0.38
TO15178 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.43■□□□□ 0.38
TO15178 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.43■□□□□ 0.38
TO15178 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TO15178 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TO15178 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.42■□□□□ 0.38
TO15178 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.42■□□□□ 0.38
TO15178 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TO15178 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.42■□□□□ 0.38
TO15178 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.42■□□□□ 0.38
TO15178 AC083906.6-201ENST00000641366 219 ntBASIC17.42■□□□□ 0.38
TO15178 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.42■□□□□ 0.38
TO15178 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 KRT8P32-201ENST00000512863 1461 ntBASIC17.42■□□□□ 0.38
TO15178 AL512353.2-201ENST00000448759 1962 ntBASIC17.42■□□□□ 0.38
TO15178 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TO15178 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TO15178 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.41■□□□□ 0.38
TO15178 AL020996.1-203ENST00000536896 2307 ntBASIC17.41■□□□□ 0.38
TO15178 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.41■□□□□ 0.38
TO15178 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.41■□□□□ 0.38
TO15178 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.41■□□□□ 0.38
TO15178 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TO15178 AC128688.1-201ENST00000487626 519 ntBASIC17.41■□□□□ 0.38
TO15178 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.41■□□□□ 0.38
TO15178 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 AC008622.2-201ENST00000617006 1229 ntBASIC17.41■□□□□ 0.38
TO15178 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.41■□□□□ 0.38
TO15178 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.41■□□□□ 0.38
TO15178 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TO15178 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TO15178 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TO15178 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TO15178 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms