Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TNRC18P3-201ENST00000441896 2691 ntBASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC097381.1-201ENST00000429019 1296 ntBASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC239859.2-201ENST00000444165 318 ntBASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC084018.2-201ENST00000613093 2607 ntBASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM256-PLSCR3K7ERE1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms