Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 AC135776.1-201ENST00000319817 2481 ntBASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 LINC01465-201ENST00000408887 1940 ntBASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 AC087386.2-201ENST00000623212 4637 ntBASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CHKB-CPT1BH3BT56 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CHKB-CPT1BH3BT56 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 AC092296.2-201ENST00000589470 999 ntBASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PEG13-201ENST00000631594 5667 ntBASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CHKB-CPT1BH3BT56 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CHKB-CPT1BH3BT56 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms