Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PLEKHD1A6NEE1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
PLEKHD1A6NEE1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
PLEKHD1A6NEE1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 AC079776.4-201ENST00000511039 504 ntBASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 RCC2P3-201ENST00000418112 1537 ntBASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC29.13■■■□□ 2.25
PLEKHD1A6NEE1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 LINC00167-201ENST00000530583 1419 ntBASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 AL512353.2-201ENST00000448759 1962 ntBASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PLEKHD1A6NEE1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 IGHV3-47-201ENST00000425060 335 ntBASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 HLA-A-201ENST00000376802 1334 ntBASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PLEKHD1A6NEE1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 AC099336.1-202ENST00000602961 463 ntBASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PLEKHD1A6NEE1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 AC007375.3-201ENST00000600936 2314 ntBASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 Z69720.1-201ENST00000601483 472 ntBASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
PLEKHD1A6NEE1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 AL671883.3-201ENST00000603274 991 ntBASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.08■■■□□ 2.25
PLEKHD1A6NEE1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PLEKHD1A6NEE1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms