Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 MTMR9LP-203ENST00000426597 1545 ntBASIC20.15■□□□□ 0.82
RCCD1A6NED2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.15■□□□□ 0.82
RCCD1A6NED2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.15■□□□□ 0.82
RCCD1A6NED2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RCCD1A6NED2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RCCD1A6NED2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.14■□□□□ 0.82
RCCD1A6NED2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.14■□□□□ 0.81
RCCD1A6NED2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RCCD1A6NED2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 RCC2P6-201ENST00000526625 1557 ntBASIC20.13■□□□□ 0.81
RCCD1A6NED2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 C1QL1P1-201ENST00000568105 661 ntBASIC20.13■□□□□ 0.81
RCCD1A6NED2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RCCD1A6NED2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 AC008764.6-201ENST00000595909 2069 ntBASIC20.12■□□□□ 0.81
RCCD1A6NED2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RCCD1A6NED2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.12■□□□□ 0.81
RCCD1A6NED2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RCCD1A6NED2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms