Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV5-3A0A0A0MS03 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-3A0A0A0MS03 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-3A0A0A0MS03 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV5-3A0A0A0MS03 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV5-3A0A0A0MS03 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 KRT8P32-201ENST00000512863 1461 ntBASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC004264.1-201ENST00000608354 794 ntBASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRBV5-3A0A0A0MS03 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC104771.1-201ENST00000603335 964 ntBASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-3A0A0A0MS03 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 KRT8P11-201ENST00000409686 1436 ntBASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-3A0A0A0MS03 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-3A0A0A0MS03 AC008764.6-201ENST00000595909 2069 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms