Protein–RNA interactions for Protein: Q9BYR5

KRTAP4-2, Keratin-associated protein 4-2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-2Q9BYR5 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-2Q9BYR5 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNU1-5P-201ENST00000362684 144 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNA5SP382-201ENST00000363355 112 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 Y_RNA.129-201ENST00000363392 110 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNA5SP472-201ENST00000363868 119 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNA5SP152-201ENST00000365184 110 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 MIR152-201ENST00000385212 87 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 MIR591-201ENST00000385290 95 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNU2-48P-201ENST00000410694 191 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNA5SP280-201ENST00000411230 115 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 AL121578.2-201ENST00000448797 447 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 AL354714.5-201ENST00000450131 590 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RNU7-185P-201ENST00000459215 60 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 snoU13.28-201ENST00000459235 104 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 AC104339.1-201ENST00000465478 348 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RN7SL502P-201ENST00000481857 290 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RN7SL153P-201ENST00000486501 292 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RN7SL143P-201ENST00000496780 297 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 Y_RNA.699-201ENST00000516803 93 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 SNRPGP19-201ENST00000603826 189 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 AL132640.3-201ENST00000630473 177 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 AC110079.1-202ENST00000635213 138 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 MIR665-201ENST00000635949 72 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 MIR1910-201ENST00000636955 80 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 5S_rRNA.29-201ENST00000641250 107 ntBASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-2Q9BYR5 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 A2MP1-204ENST00000566278 4130 ntBASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 GPI-202ENST00000415930 4000 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-2Q9BYR5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms