RNA–Protein interactions for RNA: ENST00000622142.5

PRDM11-206, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM11, Length 10,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-206ENST00000622142 MYT1Q01538 1121 aa15.84■□□□□ 0.13
PRDM11-206ENST00000622142 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
PRDM11-206ENST00000622142 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
PRDM11-206ENST00000622142 CCER1Q8TC90 406 aaPredicted RBP14.57□□□□□ -0.08
PRDM11-206ENST00000622142 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
PRDM11-206ENST00000622142 CENPBP07199 599 aaPredicted RBP14.5□□□□□ -0.09
PRDM11-206ENST00000622142 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
PRDM11-206ENST00000622142 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
PRDM11-206ENST00000622142 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
PRDM11-206ENST00000622142 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
PRDM11-206ENST00000622142 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
PRDM11-206ENST00000622142 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
PRDM11-206ENST00000622142 APLP2Q06481 763 aa14.05□□□□□ -0.16
PRDM11-206ENST00000622142 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.17
PRDM11-206ENST00000622142 NEFLP07196 543 aa14□□□□□ -0.17
PRDM11-206ENST00000622142 HRCP23327 699 aa13.85□□□□□ -0.19
PRDM11-206ENST00000622142 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
PRDM11-206ENST00000622142 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
PRDM11-206ENST00000622142 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
PRDM11-206ENST00000622142 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
PRDM11-206ENST00000622142 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.23
PRDM11-206ENST00000622142 GLIPR1L2Q4G1C9 344 aa13.58□□□□□ -0.24
PRDM11-206ENST00000622142 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
PRDM11-206ENST00000622142 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
PRDM11-206ENST00000622142 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
PRDM11-206ENST00000622142 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
PRDM11-206ENST00000622142 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
PRDM11-206ENST00000622142 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
PRDM11-206ENST00000622142 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
PRDM11-206ENST00000622142 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
PRDM11-206ENST00000622142 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
PRDM11-206ENST00000622142 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
PRDM11-206ENST00000622142 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
PRDM11-206ENST00000622142 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
PRDM11-206ENST00000622142 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
PRDM11-206ENST00000622142 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
PRDM11-206ENST00000622142 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
PRDM11-206ENST00000622142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
PRDM11-206ENST00000622142 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
PRDM11-206ENST00000622142 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
PRDM11-206ENST00000622142 ANP32CO43423 234 aa12.88□□□□□ -0.35
PRDM11-206ENST00000622142 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
PRDM11-206ENST00000622142 BCANQ96GW7 911 aa12.86□□□□□ -0.35
PRDM11-206ENST00000622142 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
PRDM11-206ENST00000622142 NCLP19338 710 aaKnown RBP12.82□□□□□ -0.36
PRDM11-206ENST00000622142 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
PRDM11-206ENST00000622142 TNNT2P45379 298 aaPredicted RBP12.82□□□□□ -0.36
PRDM11-206ENST00000622142 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
PRDM11-206ENST00000622142 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
PRDM11-206ENST00000622142 ITGAEP38570 1179 aa12.74□□□□□ -0.37
PRDM11-206ENST00000622142 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
PRDM11-206ENST00000622142 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
PRDM11-206ENST00000622142 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
PRDM11-206ENST00000622142 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
PRDM11-206ENST00000622142 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
PRDM11-206ENST00000622142 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
PRDM11-206ENST00000622142 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
PRDM11-206ENST00000622142 FKBP8Q14318 412 aa12.59□□□□□ -0.39
PRDM11-206ENST00000622142 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
PRDM11-206ENST00000622142 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
PRDM11-206ENST00000622142 NBR1Q14596 966 aa12.52□□□□□ -0.4
PRDM11-206ENST00000622142 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
PRDM11-206ENST00000622142 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
PRDM11-206ENST00000622142 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
PRDM11-206ENST00000622142 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
PRDM11-206ENST00000622142 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
PRDM11-206ENST00000622142 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
PRDM11-206ENST00000622142 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
PRDM11-206ENST00000622142 SLC4A1APQ9BWU0 796 aaKnown RBP12.42□□□□□ -0.42
PRDM11-206ENST00000622142 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
PRDM11-206ENST00000622142 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
PRDM11-206ENST00000622142 BECN1Q14457 450 aa12.41□□□□□ -0.42
PRDM11-206ENST00000622142 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRDM11-206ENST00000622142 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
PRDM11-206ENST00000622142 NEFMP07197 916 aa12.39□□□□□ -0.43
PRDM11-206ENST00000622142 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
PRDM11-206ENST00000622142 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
PRDM11-206ENST00000622142 PTMSP20962 102 aa12.32□□□□□ -0.44
PRDM11-206ENST00000622142 NOP58Q9Y2X3 529 aaKnown RBP12.31□□□□□ -0.44
PRDM11-206ENST00000622142 GOLGA6L22H0YM25 854 aa12.29□□□□□ -0.44
PRDM11-206ENST00000622142 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
PRDM11-206ENST00000622142 MIER1Q8N108 512 aa12.29□□□□□ -0.44
PRDM11-206ENST00000622142 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
PRDM11-206ENST00000622142 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
PRDM11-206ENST00000622142 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
PRDM11-206ENST00000622142 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
PRDM11-206ENST00000622142 DEKP35659 375 aaKnown RBP12.2□□□□□ -0.46
PRDM11-206ENST00000622142 CHAF1AQ13111 956 aaPredicted RBP12.2□□□□□ -0.46
PRDM11-206ENST00000622142 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
PRDM11-206ENST00000622142 MRS2Q9HD23 443 aa12.19□□□□□ -0.46
PRDM11-206ENST00000622142 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
PRDM11-206ENST00000622142 ARXQ96QS3 562 aa12.19□□□□□ -0.46
PRDM11-206ENST00000622142 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
PRDM11-206ENST00000622142 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
PRDM11-206ENST00000622142 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
PRDM11-206ENST00000622142 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
PRDM11-206ENST00000622142 EEA1Q15075 1411 aa12.16□□□□□ -0.46
PRDM11-206ENST00000622142 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
PRDM11-206ENST00000622142 MYH16Q9H6N6 1097 aa12.15□□□□□ -0.46
PRDM11-206ENST00000622142 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms