Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 RNA5SP113-201ENST00000410486 84 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 YME1L1P1-201ENST00000429435 297 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 AC016831.4-201ENST00000438302 307 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 RNU6-221P-201ENST00000459541 99 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 AC008155.2-201ENST00000464337 397 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 AC069200.1-201ENST00000609511 323 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 AC091953.3-201ENST00000623220 236 ntBASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS9D1Q9Y2B5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 FAM35CP-201ENST00000554755 2470 ntBASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS9D1Q9Y2B5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 SNORA12-201ENST00000391162 147 ntBASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 PTMAP3-201ENST00000447474 330 ntBASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-267P-201ENST00000516714 103 ntBASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 AC006435.5-201ENST00000624486 112 ntBASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS9D1Q9Y2B5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 RNA5SP443-201ENST00000363083 132 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 U8.17-201ENST00000391292 132 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 MRPS17P9-201ENST00000511924 393 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-795P-201ENST00000516323 103 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 RNA5SP360-201ENST00000516555 118 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 IGKV1-32-201ENST00000519290 311 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 AP001880.2-201ENST00000538233 448 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 AC011604.1-201ENST00000545978 196 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 AC015912.2-201ENST00000571053 181 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 AC012531.4-201ENST00000616509 177 ntBASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS9D1Q9Y2B5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AP001273.1-201ENST00000624493 3152 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-170P-201ENST00000362832 104 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 SNORA33-201ENST00000363664 130 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-1210P-201ENST00000363775 107 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RN7SKP103-201ENST00000363848 320 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-944P-201ENST00000364023 107 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 SNORA71.2-201ENST00000364941 134 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-748P-201ENST00000384648 107 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-1104P-201ENST00000384723 104 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 MIR1283-1-201ENST00000408494 87 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RPL37P18-201ENST00000411602 243 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 Z74021.1-201ENST00000423610 407 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU7-164P-201ENST00000459221 62 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AC083982.1-201ENST00000485679 344 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-693P-201ENST00000516134 107 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 RNU5F-4P-201ENST00000516581 114 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AL110118.1-201ENST00000553543 400 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 MIR4480-201ENST00000582492 71 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 MIR5197-201ENST00000583721 112 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 MIR4737-201ENST00000583979 81 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 MIR6798-201ENST00000612887 67 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AC087385.3-201ENST00000620477 187 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 AC140113.4-201ENST00000622087 222 ntBASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS9D1Q9Y2B5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 MFSD8-242ENST00000641690 4199 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-349P-201ENST00000362402 107 ntBASIC4.62□□□□□ -1.67
VPS9D1Q9Y2B5 RNU6-655P-201ENST00000362858 107 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms