RNA–Protein interactions for RNA: ENST00000296795.7

TLR3-201, Transcript of toll like receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TLR3, Length 6,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR3-201ENST00000296795 NISCHQ9Y2I1 1504 aa8.69□□□□□ -1.02
TLR3-201ENST00000296795 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
TLR3-201ENST00000296795 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
TLR3-201ENST00000296795 SUPT5HO00267 1087 aaKnown RBP7.96□□□□□ -1.13
TLR3-201ENST00000296795 ABCC9O60706 1549 aa7.74□□□□□ -1.17
TLR3-201ENST00000296795 EHMT2Q96KQ7 1210 aa7.74□□□□□ -1.17
TLR3-201ENST00000296795 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
TLR3-201ENST00000296795 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
TLR3-201ENST00000296795 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
TLR3-201ENST00000296795 CHIC1Q5VXU3 224 aa7.4□□□□□ -1.23
TLR3-201ENST00000296795 TTBK1Q5TCY1 1321 aaPredicted RBP7.38□□□□□ -1.23
TLR3-201ENST00000296795 TRIM41Q8WV44 630 aa7.35□□□□□ -1.23
TLR3-201ENST00000296795 ATP1B4Q9UN42 357 aaPredicted RBP7.33□□□□□ -1.24
TLR3-201ENST00000296795 SCRIBQ14160 1630 aa7.3□□□□□ -1.24
TLR3-201ENST00000296795 CCDC180Q9P1Z9 1646 aa7.28□□□□□ -1.24
TLR3-201ENST00000296795 APLP2Q06481 763 aa7.28□□□□□ -1.24
TLR3-201ENST00000296795 UBTFP17480 764 aaKnown RBP7.25□□□□□ -1.25
TLR3-201ENST00000296795 ZCCHC6Q5VYS8 1495 aaKnown RBP7.18□□□□□ -1.26
TLR3-201ENST00000296795 RB1CC1Q8TDY2 1594 aa7.16□□□□□ -1.26
TLR3-201ENST00000296795 PPARGC1BQ86YN6 1023 aaKnown RBP7.14□□□□□ -1.27
TLR3-201ENST00000296795 FBLN2P98095 1184 aa7.14□□□□□ -1.27
TLR3-201ENST00000296795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.14□□□□□ -1.27
TLR3-201ENST00000296795 HNRNPUL2Q1KMD3 747 aaKnown RBP7.14□□□□□ -1.27
TLR3-201ENST00000296795 MYT1LQ9UL68 1186 aa7.08□□□□□ -1.28
TLR3-201ENST00000296795 LOC105371045A0A1W2PR82 267 aa7.05□□□□□ -1.28
TLR3-201ENST00000296795 NACADO15069 1562 aa7.05□□□□□ -1.28
TLR3-201ENST00000296795 PCGF6Q9BYE7 350 aa7.02□□□□□ -1.29
TLR3-201ENST00000296795 ITGAEP38570 1179 aa7.01□□□□□ -1.29
TLR3-201ENST00000296795 ARID3CA6NKF2 412 aa6.99□□□□□ -1.29
TLR3-201ENST00000296795 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
TLR3-201ENST00000296795 AEBP2Q6ZN18 517 aaPredicted RBP6.94□□□□□ -1.3
TLR3-201ENST00000296795 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
TLR3-201ENST00000296795 ERCC6Q03468 1493 aa6.9□□□□□ -1.3
TLR3-201ENST00000296795 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
TLR3-201ENST00000296795 CECR2Q9BXF3 1484 aa6.89□□□□□ -1.31
TLR3-201ENST00000296795 RSF1Q96T23 1441 aaPredicted RBP6.86□□□□□ -1.31
TLR3-201ENST00000296795 FAM50AQ14320 339 aaKnown RBP6.85□□□□□ -1.31
TLR3-201ENST00000296795 CHMP7Q8WUX9 453 aaPredicted RBP6.84□□□□□ -1.31
TLR3-201ENST00000296795 DCAF1Q9Y4B6 1507 aa6.83□□□□□ -1.32
TLR3-201ENST00000296795 PLPPR3Q6T4P5 718 aa6.82□□□□□ -1.32
TLR3-201ENST00000296795 CSRNP3Q8WYN3 585 aa6.82□□□□□ -1.32
TLR3-201ENST00000296795 BAZ1AQ9NRL2 1556 aaPredicted RBP6.8□□□□□ -1.32
TLR3-201ENST00000296795 ZNF777Q9ULD5 760 aaPredicted RBP6.8□□□□□ -1.32
TLR3-201ENST00000296795 MROH2BQ7Z745 1585 aa6.78□□□□□ -1.32
TLR3-201ENST00000296795 POLR3GLQ9BT43 218 aa6.78□□□□□ -1.32
TLR3-201ENST00000296795 NPM1P06748 294 aaKnown RBP eCLIP6.77□□□□□ -1.33
TLR3-201ENST00000296795 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
TLR3-201ENST00000296795 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
TLR3-201ENST00000296795 PELP1Q8IZL8 1130 aaKnown RBP6.75□□□□□ -1.33
TLR3-201ENST00000296795 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
TLR3-201ENST00000296795 WIZO95785 1651 aa6.73□□□□□ -1.33
TLR3-201ENST00000296795 SMARCA2P51531 1590 aa6.71□□□□□ -1.33
TLR3-201ENST00000296795 KCNH8Q96L42 1107 aa6.71□□□□□ -1.33
TLR3-201ENST00000296795 WRNQ14191 1432 aaPredicted RBP eCLIP6.71□□□□□ -1.34
TLR3-201ENST00000296795 SLC4A1APQ9BWU0 796 aaKnown RBP6.71□□□□□ -1.34
TLR3-201ENST00000296795 CCDC88BA6NC98 1476 aa6.7□□□□□ -1.34
TLR3-201ENST00000296795 BCANQ96GW7 911 aa6.69□□□□□ -1.34
TLR3-201ENST00000296795 NEUROD1Q13562 356 aa6.68□□□□□ -1.34
TLR3-201ENST00000296795 MYO15BQ96JP2 1530 aa6.68□□□□□ -1.34
TLR3-201ENST00000296795 ZNF326Q5BKZ1 582 aaKnown RBP6.68□□□□□ -1.34
TLR3-201ENST00000296795 CDK11AQ9UQ88 783 aaPredicted RBP6.68□□□□□ -1.34
TLR3-201ENST00000296795 TRHP20396 242 aaPredicted RBP6.68□□□□□ -1.34
TLR3-201ENST00000296795 ZEB1P37275 1124 aaPredicted RBP6.67□□□□□ -1.34
TLR3-201ENST00000296795 PDS5BQ9NTI5 1447 aa6.67□□□□□ -1.34
TLR3-201ENST00000296795 YTHDC1Q96MU7 727 aaKnown RBP6.67□□□□□ -1.34
TLR3-201ENST00000296795 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
TLR3-201ENST00000296795 SMARCA4P51532 1647 aa6.66□□□□□ -1.34
TLR3-201ENST00000296795 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
TLR3-201ENST00000296795 EIF4G1Q04637 1599 aaKnown RBP6.65□□□□□ -1.34
TLR3-201ENST00000296795 ABCC8Q09428 1581 aa6.65□□□□□ -1.34
TLR3-201ENST00000296795 CENPBP07199 599 aaPredicted RBP6.65□□□□□ -1.35
TLR3-201ENST00000296795 TDRD9Q8NDG6 1382 aaKnown RBP6.65□□□□□ -1.35
TLR3-201ENST00000296795 SENP3Q9H4L4 574 aaPredicted RBP6.64□□□□□ -1.35
TLR3-201ENST00000296795 DNAJC5BQ9UF47 199 aa6.64□□□□□ -1.35
TLR3-201ENST00000296795 CHIC2Q9UKJ5 165 aa6.64□□□□□ -1.35
TLR3-201ENST00000296795 CUX2O14529 1486 aa6.64□□□□□ -1.35
TLR3-201ENST00000296795 KIF27Q86VH2 1401 aa6.63□□□□□ -1.35
TLR3-201ENST00000296795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.63□□□□□ -1.35
TLR3-201ENST00000296795 CADPSQ9ULU8 1353 aa6.62□□□□□ -1.35
TLR3-201ENST00000296795 CHGAP10645 457 aaKnown RBP6.62□□□□□ -1.35
TLR3-201ENST00000296795 TOP2AP11388 1531 aaKnown RBP6.62□□□□□ -1.35
TLR3-201ENST00000296795 SOGA1O94964 1423 aa6.61□□□□□ -1.35
TLR3-201ENST00000296795 CC2D2AQ9P2K1 1620 aa6.61□□□□□ -1.35
TLR3-201ENST00000296795 CEP164Q9UPV0 1460 aa6.6□□□□□ -1.35
TLR3-201ENST00000296795 STAG3Q9UJ98 1225 aa6.59□□□□□ -1.35
TLR3-201ENST00000296795 ARID4BQ4LE39 1312 aaPredicted RBP6.59□□□□□ -1.35
TLR3-201ENST00000296795 MTUS2Q5JR59 1369 aa6.59□□□□□ -1.36
TLR3-201ENST00000296795 FANCD2Q9BXW9 1451 aa6.58□□□□□ -1.36
TLR3-201ENST00000296795 CLIP1P30622 1438 aa6.58□□□□□ -1.36
TLR3-201ENST00000296795 PLEKHD1A6NEE1 506 aa6.58□□□□□ -1.36
TLR3-201ENST00000296795 CARMIL1Q5VZK9 1371 aa6.57□□□□□ -1.36
TLR3-201ENST00000296795 HRCP23327 699 aa6.57□□□□□ -1.36
TLR3-201ENST00000296795 ERICH6Q7L0X2 663 aa6.56□□□□□ -1.36
TLR3-201ENST00000296795 NESP48681 1621 aa6.56□□□□□ -1.36
TLR3-201ENST00000296795 GOLGA3Q08378 1498 aa6.56□□□□□ -1.36
TLR3-201ENST00000296795 TSPY4P0CV99 314 aa6.53□□□□□ -1.36
TLR3-201ENST00000296795 TSPY10P0CW01 314 aa6.53□□□□□ -1.36
TLR3-201ENST00000296795 CYB5RLQ6IPT4 315 aa6.53□□□□□ -1.36
TLR3-201ENST00000296795 RRP7BPQ9NSQ0 103 aa6.53□□□□□ -1.36
TLR3-201ENST00000296795 CEP162Q5TB80 1403 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms