RNA–Protein interactions for RNA: ENST00000392833.6

VEPH1-203, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VEPH1, Length 3,979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-203ENST00000392833 CHIC1Q5VXU3 224 aa10.55□□□□□ -0.72
VEPH1-203ENST00000392833 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
VEPH1-203ENST00000392833 NISCHQ9Y2I1 1504 aa9.79□□□□□ -0.84
VEPH1-203ENST00000392833 PHF23Q9BUL5 403 aaPredicted RBP9.35□□□□□ -0.91
VEPH1-203ENST00000392833 SENP3Q9H4L4 574 aaPredicted RBP8.8□□□□□ -1
VEPH1-203ENST00000392833 CCDC180Q9P1Z9 1646 aa8.79□□□□□ -1
VEPH1-203ENST00000392833 ABCC9O60706 1549 aa8.65□□□□□ -1.02
VEPH1-203ENST00000392833 PLPPR3Q6T4P5 718 aa8.57□□□□□ -1.04
VEPH1-203ENST00000392833 RB1CC1Q8TDY2 1594 aa8.32□□□□□ -1.08
VEPH1-203ENST00000392833 NACADO15069 1562 aa8.3□□□□□ -1.08
VEPH1-203ENST00000392833 MYO15BQ96JP2 1530 aa8.23□□□□□ -1.09
VEPH1-203ENST00000392833 FOXD1Q16676 465 aa8.17□□□□□ -1.1
VEPH1-203ENST00000392833 DCAF8L2P0C7V8 631 aa8.16□□□□□ -1.1
VEPH1-203ENST00000392833 DCAF1Q9Y4B6 1507 aa8.14□□□□□ -1.11
VEPH1-203ENST00000392833 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
VEPH1-203ENST00000392833 UNC13AQ9UPW8 1703 aa8.07□□□□□ -1.12
VEPH1-203ENST00000392833 PPP6R1Q9UPN7 881 aa8.06□□□□□ -1.12
VEPH1-203ENST00000392833 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
VEPH1-203ENST00000392833 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
VEPH1-203ENST00000392833 BICRAQ9NZM4 1560 aa8.04□□□□□ -1.12
VEPH1-203ENST00000392833 DNAJC5BQ9UF47 199 aa8.02□□□□□ -1.13
VEPH1-203ENST00000392833 ADRA2BP18089 450 aa8□□□□□ -1.13
VEPH1-203ENST00000392833 SCRIBQ14160 1630 aa7.94□□□□□ -1.14
VEPH1-203ENST00000392833 EIF4G1Q04637 1599 aaKnown RBP7.85□□□□□ -1.15
VEPH1-203ENST00000392833 CC2D2AQ9P2K1 1620 aa7.83□□□□□ -1.16
VEPH1-203ENST00000392833 CECR2Q9BXF3 1484 aa7.82□□□□□ -1.16
VEPH1-203ENST00000392833 KCNA4P22459 653 aa7.67□□□□□ -1.18
VEPH1-203ENST00000392833 NCAPD3P42695 1498 aa7.65□□□□□ -1.19
VEPH1-203ENST00000392833 SMARCA2P51531 1590 aa7.62□□□□□ -1.19
VEPH1-203ENST00000392833 SMARCA4P51532 1647 aa7.62□□□□□ -1.19
VEPH1-203ENST00000392833 ATAD2BQ9ULI0 1458 aa7.61□□□□□ -1.19
VEPH1-203ENST00000392833 BAZ1AQ9NRL2 1556 aaPredicted RBP7.61□□□□□ -1.19
VEPH1-203ENST00000392833 HMGXB3Q12766 1538 aa7.61□□□□□ -1.19
VEPH1-203ENST00000392833 NCBP3Q53F19 620 aaKnown RBP7.59□□□□□ -1.19
VEPH1-203ENST00000392833 PIAS4Q8N2W9 510 aaPredicted RBP7.59□□□□□ -1.2
VEPH1-203ENST00000392833 PPP4R3CPQ6ZMV5 832 aa7.58□□□□□ -1.2
VEPH1-203ENST00000392833 PEG3Q9GZU2 1588 aa7.57□□□□□ -1.2
VEPH1-203ENST00000392833 BAZ1BQ9UIG0 1483 aaKnown RBP7.54□□□□□ -1.2
VEPH1-203ENST00000392833 MROH2BQ7Z745 1585 aa7.51□□□□□ -1.21
VEPH1-203ENST00000392833 CUX2O14529 1486 aa7.5□□□□□ -1.21
VEPH1-203ENST00000392833 ERCC6Q03468 1493 aa7.5□□□□□ -1.21
VEPH1-203ENST00000392833 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
VEPH1-203ENST00000392833 LAMC3Q9Y6N6 1575 aa7.47□□□□□ -1.21
VEPH1-203ENST00000392833 NESP48681 1621 aa7.44□□□□□ -1.22
VEPH1-203ENST00000392833 PDS5BQ9NTI5 1447 aa7.42□□□□□ -1.22
VEPH1-203ENST00000392833 WIZO95785 1651 aa7.41□□□□□ -1.22
VEPH1-203ENST00000392833 CADPSQ9ULU8 1353 aa7.41□□□□□ -1.22
VEPH1-203ENST00000392833 MSH5O43196 834 aa7.4□□□□□ -1.22
VEPH1-203ENST00000392833 RSF1Q96T23 1441 aaPredicted RBP7.39□□□□□ -1.23
VEPH1-203ENST00000392833 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
VEPH1-203ENST00000392833 NPM3O75607 178 aaKnown RBP7.39□□□□□ -1.23
VEPH1-203ENST00000392833 DNAJC5Q9H3Z4 198 aa7.38□□□□□ -1.23
VEPH1-203ENST00000392833 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
VEPH1-203ENST00000392833 CNKSR2Q8WXI2 1034 aa7.36□□□□□ -1.23
VEPH1-203ENST00000392833 KIF21AQ7Z4S6 1674 aa7.35□□□□□ -1.23
VEPH1-203ENST00000392833 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
VEPH1-203ENST00000392833 CFTRP13569 1480 aa7.34□□□□□ -1.24
VEPH1-203ENST00000392833 CEP164Q9UPV0 1460 aa7.33□□□□□ -1.24
VEPH1-203ENST00000392833 WDR62O43379 1518 aa7.32□□□□□ -1.24
VEPH1-203ENST00000392833 FANCD2Q9BXW9 1451 aa7.31□□□□□ -1.24
VEPH1-203ENST00000392833 CSRNP3Q8WYN3 585 aa7.3□□□□□ -1.24
VEPH1-203ENST00000392833 SLC4A1APQ9BWU0 796 aaKnown RBP7.3□□□□□ -1.24
VEPH1-203ENST00000392833 EHMT2Q96KQ7 1210 aa7.29□□□□□ -1.24
VEPH1-203ENST00000392833 PRDM2Q13029 1718 aa7.26□□□□□ -1.25
VEPH1-203ENST00000392833 CCDC88BA6NC98 1476 aa7.26□□□□□ -1.25
VEPH1-203ENST00000392833 URB2Q14146 1524 aaKnown RBP7.23□□□□□ -1.25
VEPH1-203ENST00000392833 ABCC8Q09428 1581 aa7.22□□□□□ -1.25
VEPH1-203ENST00000392833 RNF216Q9NWF9 866 aaPredicted RBP7.21□□□□□ -1.25
VEPH1-203ENST00000392833 HOXD11P31277 338 aaPredicted RBP7.19□□□□□ -1.26
VEPH1-203ENST00000392833 POTEDQ86YR6 584 aa7.19□□□□□ -1.26
VEPH1-203ENST00000392833 IFT140Q96RY7 1462 aa7.19□□□□□ -1.26
VEPH1-203ENST00000392833 ZBTB22O15209 634 aa7.19□□□□□ -1.26
VEPH1-203ENST00000392833 TOPBP1Q92547 1522 aa7.18□□□□□ -1.26
VEPH1-203ENST00000392833 DNMBPQ6XZF7 1577 aa7.17□□□□□ -1.26
VEPH1-203ENST00000392833 DMRT2Q9Y5R5 561 aa7.17□□□□□ -1.26
VEPH1-203ENST00000392833 MAPK8IP2Q13387 824 aaPredicted RBP7.16□□□□□ -1.26
VEPH1-203ENST00000392833 OSCARQ8IYS5 282 aa7.14□□□□□ -1.27
VEPH1-203ENST00000392833 ZNF608Q9ULD9 1512 aaPredicted RBP7.11□□□□□ -1.27
VEPH1-203ENST00000392833 WDR97A6NE52 1622 aa7.11□□□□□ -1.27
VEPH1-203ENST00000392833 POLA1P09884 1462 aaPredicted RBP7.1□□□□□ -1.27
VEPH1-203ENST00000392833 TARBP1Q13395 1621 aaKnown RBP7.1□□□□□ -1.27
VEPH1-203ENST00000392833 EIF4G3O43432 1585 aaKnown RBP7.1□□□□□ -1.27
VEPH1-203ENST00000392833 SOGA1O94964 1423 aa7.08□□□□□ -1.28
VEPH1-203ENST00000392833 FGD5Q6ZNL6 1462 aa7.07□□□□□ -1.28
VEPH1-203ENST00000392833 CUX1P39880 1505 aa7.06□□□□□ -1.28
VEPH1-203ENST00000392833 SUPT5HO00267 1087 aaKnown RBP7.06□□□□□ -1.28
VEPH1-203ENST00000392833 AQRO60306 1485 aaKnown RBP eCLIP7.06□□□□□ -1.28
VEPH1-203ENST00000392833 RAD54L2Q9Y4B4 1467 aa7.05□□□□□ -1.28
VEPH1-203ENST00000392833 TRIM41Q8WV44 630 aa7.04□□□□□ -1.28
VEPH1-203ENST00000392833 MAGI1Q96QZ7 1491 aaPredicted RBP7.03□□□□□ -1.28
VEPH1-203ENST00000392833 GRIN2BQ13224 1484 aa7.03□□□□□ -1.28
VEPH1-203ENST00000392833 TDRD9Q8NDG6 1382 aaKnown RBP7.03□□□□□ -1.28
VEPH1-203ENST00000392833 CHD1O14646 1710 aa7.02□□□□□ -1.29
VEPH1-203ENST00000392833 ABCA10Q8WWZ4 1543 aa7.02□□□□□ -1.29
VEPH1-203ENST00000392833 RIMBP3CA6NJZ7 1639 aa7.01□□□□□ -1.29
VEPH1-203ENST00000392833 RIMBP3BA6NNM3 1639 aa7.01□□□□□ -1.29
VEPH1-203ENST00000392833 RIMBP3Q9UFD9 1639 aa7.01□□□□□ -1.29
VEPH1-203ENST00000392833 ARHGEF11O15085 1522 aa7.01□□□□□ -1.29
VEPH1-203ENST00000392833 SNAPC4Q5SXM2 1469 aa7.01□□□□□ -1.29
VEPH1-203ENST00000392833 FOXD4L1Q9NU39 408 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms