RNA–Protein interactions for RNA: ENST00000525053.5

FGD4-210, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2 BASIC

Gene FGD4, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-210ENST00000525053 AEBP2Q6ZN18 517 aaPredicted RBP10.62□□□□□ -0.71
FGD4-210ENST00000525053 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
FGD4-210ENST00000525053 NISCHQ9Y2I1 1504 aa9.68□□□□□ -0.86
FGD4-210ENST00000525053 SENP3Q9H4L4 574 aaPredicted RBP9.49□□□□□ -0.89
FGD4-210ENST00000525053 PHF23Q9BUL5 403 aaPredicted RBP9.13□□□□□ -0.95
FGD4-210ENST00000525053 PELP1Q8IZL8 1130 aaKnown RBP8.67□□□□□ -1.02
FGD4-210ENST00000525053 MYT1Q01538 1121 aa8.61□□□□□ -1.03
FGD4-210ENST00000525053 FOXD1Q16676 465 aa8.61□□□□□ -1.03
FGD4-210ENST00000525053 MSH5O43196 834 aa8.5□□□□□ -1.05
FGD4-210ENST00000525053 POTEDQ86YR6 584 aa8.4□□□□□ -1.06
FGD4-210ENST00000525053 TTBK1Q5TCY1 1321 aaPredicted RBP8.36□□□□□ -1.07
FGD4-210ENST00000525053 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
FGD4-210ENST00000525053 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
FGD4-210ENST00000525053 CCDC180Q9P1Z9 1646 aa8.21□□□□□ -1.09
FGD4-210ENST00000525053 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
FGD4-210ENST00000525053 PLPPR3Q6T4P5 718 aa8.08□□□□□ -1.12
FGD4-210ENST00000525053 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
FGD4-210ENST00000525053 ABCC9O60706 1549 aa8.02□□□□□ -1.12
FGD4-210ENST00000525053 PIAS4Q8N2W9 510 aaPredicted RBP8.01□□□□□ -1.13
FGD4-210ENST00000525053 PRKCSHP14314 528 aaPredicted RBP7.87□□□□□ -1.15
FGD4-210ENST00000525053 APLP2Q06481 763 aa7.87□□□□□ -1.15
FGD4-210ENST00000525053 ERICH6Q7L0X2 663 aa7.87□□□□□ -1.15
FGD4-210ENST00000525053 DCAF1Q9Y4B6 1507 aa7.85□□□□□ -1.15
FGD4-210ENST00000525053 HRCP23327 699 aa7.83□□□□□ -1.16
FGD4-210ENST00000525053 SLC24A1O60721 1099 aa7.82□□□□□ -1.16
FGD4-210ENST00000525053 SCRIBQ14160 1630 aa7.81□□□□□ -1.16
FGD4-210ENST00000525053 NACADO15069 1562 aa7.71□□□□□ -1.18
FGD4-210ENST00000525053 MYO15BQ96JP2 1530 aa7.7□□□□□ -1.18
FGD4-210ENST00000525053 PABPN1Q86U42 306 aaKnown RBP eCLIP7.69□□□□□ -1.18
FGD4-210ENST00000525053 ADRA2BP18089 450 aa7.68□□□□□ -1.18
FGD4-210ENST00000525053 PPP6R1Q9UPN7 881 aa7.68□□□□□ -1.18
FGD4-210ENST00000525053 RB1CC1Q8TDY2 1594 aa7.65□□□□□ -1.18
FGD4-210ENST00000525053 SCAF1Q9H7N4 1312 aaKnown RBP7.64□□□□□ -1.19
FGD4-210ENST00000525053 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
FGD4-210ENST00000525053 CECR2Q9BXF3 1484 aa7.63□□□□□ -1.19
FGD4-210ENST00000525053 RSF1Q96T23 1441 aaPredicted RBP7.62□□□□□ -1.19
FGD4-210ENST00000525053 DAXXQ9UER7 740 aaPredicted RBP7.57□□□□□ -1.2
FGD4-210ENST00000525053 MROH2BQ7Z745 1585 aa7.55□□□□□ -1.2
FGD4-210ENST00000525053 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
FGD4-210ENST00000525053 EHMT2Q96KQ7 1210 aa7.48□□□□□ -1.21
FGD4-210ENST00000525053 CENPBP07199 599 aaPredicted RBP7.47□□□□□ -1.21
FGD4-210ENST00000525053 WIZO95785 1651 aa7.47□□□□□ -1.21
FGD4-210ENST00000525053 BICRAQ9NZM4 1560 aa7.45□□□□□ -1.22
FGD4-210ENST00000525053 UNC13AQ9UPW8 1703 aa7.45□□□□□ -1.22
FGD4-210ENST00000525053 LOC105371045A0A1W2PR82 267 aa7.45□□□□□ -1.22
FGD4-210ENST00000525053 TRIM41Q8WV44 630 aa7.45□□□□□ -1.22
FGD4-210ENST00000525053 DMRT2Q9Y5R5 561 aa7.45□□□□□ -1.22
FGD4-210ENST00000525053 BAZ1AQ9NRL2 1556 aaPredicted RBP7.44□□□□□ -1.22
FGD4-210ENST00000525053 SMARCA4P51532 1647 aa7.39□□□□□ -1.23
FGD4-210ENST00000525053 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
FGD4-210ENST00000525053 ACIN1Q9UKV3 1341 aaKnown RBP7.35□□□□□ -1.23
FGD4-210ENST00000525053 CCDC88BA6NC98 1476 aa7.34□□□□□ -1.23
FGD4-210ENST00000525053 TOP2AP11388 1531 aaKnown RBP7.32□□□□□ -1.24
FGD4-210ENST00000525053 ATAD2BQ9ULI0 1458 aa7.31□□□□□ -1.24
FGD4-210ENST00000525053 ANP32EQ9BTT0 268 aa7.3□□□□□ -1.24
FGD4-210ENST00000525053 BAZ1BQ9UIG0 1483 aaKnown RBP7.29□□□□□ -1.24
FGD4-210ENST00000525053 EIF5BO60841 1220 aaKnown RBP7.29□□□□□ -1.24
FGD4-210ENST00000525053 ZEB1P37275 1124 aaPredicted RBP7.29□□□□□ -1.24
FGD4-210ENST00000525053 SMARCA2P51531 1590 aa7.28□□□□□ -1.24
FGD4-210ENST00000525053 ABCC8Q09428 1581 aa7.28□□□□□ -1.24
FGD4-210ENST00000525053 DNAJC5BQ9UF47 199 aa7.25□□□□□ -1.25
FGD4-210ENST00000525053 EIF4G1Q04637 1599 aaKnown RBP7.25□□□□□ -1.25
FGD4-210ENST00000525053 CACNB1Q02641 598 aaPredicted RBP7.23□□□□□ -1.25
FGD4-210ENST00000525053 UBE2Q2Q8WVN8 375 aa7.22□□□□□ -1.25
FGD4-210ENST00000525053 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.25
FGD4-210ENST00000525053 PEG3Q9GZU2 1588 aa7.21□□□□□ -1.26
FGD4-210ENST00000525053 GTF3C3Q9Y5Q9 886 aa7.21□□□□□ -1.26
FGD4-210ENST00000525053 SOGA1O94964 1423 aa7.19□□□□□ -1.26
FGD4-210ENST00000525053 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
FGD4-210ENST00000525053 NCAPD3P42695 1498 aa7.18□□□□□ -1.26
FGD4-210ENST00000525053 WRNQ14191 1432 aaPredicted RBP eCLIP7.18□□□□□ -1.26
FGD4-210ENST00000525053 RANGAP1P46060 587 aaPredicted RBP7.17□□□□□ -1.26
FGD4-210ENST00000525053 RUSC2Q8N2Y8 1516 aa7.16□□□□□ -1.26
FGD4-210ENST00000525053 UBTFP17480 764 aaKnown RBP7.15□□□□□ -1.26
FGD4-210ENST00000525053 CSRNP3Q8WYN3 585 aa7.14□□□□□ -1.27
FGD4-210ENST00000525053 CC2D2AQ9P2K1 1620 aa7.13□□□□□ -1.27
FGD4-210ENST00000525053 HMGXB3Q12766 1538 aa7.11□□□□□ -1.27
FGD4-210ENST00000525053 SYNJ1O43426 1573 aa7.11□□□□□ -1.27
FGD4-210ENST00000525053 HOXD11P31277 338 aaPredicted RBP7.1□□□□□ -1.27
FGD4-210ENST00000525053 C1QBPQ07021 282 aaKnown RBP7.1□□□□□ -1.27
FGD4-210ENST00000525053 CADPSQ9ULU8 1353 aa7.07□□□□□ -1.28
FGD4-210ENST00000525053 CFTRP13569 1480 aa7.07□□□□□ -1.28
FGD4-210ENST00000525053 CLSPNQ9HAW4 1339 aa7.07□□□□□ -1.28
FGD4-210ENST00000525053 NESP48681 1621 aa7.06□□□□□ -1.28
FGD4-210ENST00000525053 MAPK8IP2Q13387 824 aaPredicted RBP7.06□□□□□ -1.28
FGD4-210ENST00000525053 ERICH6BQ5W0A0 696 aa7.05□□□□□ -1.28
FGD4-210ENST00000525053 RNF39Q9H2S5 420 aa7.05□□□□□ -1.28
FGD4-210ENST00000525053 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
FGD4-210ENST00000525053 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
FGD4-210ENST00000525053 CEP162Q5TB80 1403 aa7.03□□□□□ -1.28
FGD4-210ENST00000525053 CUX1P39880 1505 aa7.03□□□□□ -1.28
FGD4-210ENST00000525053 EEA1Q15075 1411 aa7.02□□□□□ -1.29
FGD4-210ENST00000525053 RNF216Q9NWF9 866 aaPredicted RBP7.01□□□□□ -1.29
FGD4-210ENST00000525053 ANO8Q9HCE9 1232 aaPredicted RBP7□□□□□ -1.29
FGD4-210ENST00000525053 FANCD2Q9BXW9 1451 aa7□□□□□ -1.29
FGD4-210ENST00000525053 RAPGEF2Q9Y4G8 1499 aa7□□□□□ -1.29
FGD4-210ENST00000525053 GOLGA3Q08378 1498 aa7□□□□□ -1.29
FGD4-210ENST00000525053 TNIKQ9UKE5 1360 aa7□□□□□ -1.29
FGD4-210ENST00000525053 TOP2BQ02880 1626 aa6.99□□□□□ -1.29
FGD4-210ENST00000525053 CNKSR2Q8WXI2 1034 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms