RNA–Protein interactions for RNA: ENST00000409282.1

LRRTM4-203, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-203ENST00000409282 PELP1Q8IZL8 1130 aaKnown RBP8.64□□□□□ -1.03
LRRTM4-203ENST00000409282 MYT1Q01538 1121 aa8.61□□□□□ -1.03
LRRTM4-203ENST00000409282 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
LRRTM4-203ENST00000409282 POTEDQ86YR6 584 aa8.47□□□□□ -1.05
LRRTM4-203ENST00000409282 TTBK1Q5TCY1 1321 aaPredicted RBP8.35□□□□□ -1.07
LRRTM4-203ENST00000409282 NISCHQ9Y2I1 1504 aa8.21□□□□□ -1.1
LRRTM4-203ENST00000409282 CHIC1Q5VXU3 224 aa8.08□□□□□ -1.12
LRRTM4-203ENST00000409282 ABCC9O60706 1549 aa7.99□□□□□ -1.13
LRRTM4-203ENST00000409282 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
LRRTM4-203ENST00000409282 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
LRRTM4-203ENST00000409282 CCDC180Q9P1Z9 1646 aa7.91□□□□□ -1.14
LRRTM4-203ENST00000409282 PRKCSHP14314 528 aaPredicted RBP7.89□□□□□ -1.15
LRRTM4-203ENST00000409282 DNAJC5BQ9UF47 199 aa7.86□□□□□ -1.15
LRRTM4-203ENST00000409282 APLP2Q06481 763 aa7.86□□□□□ -1.15
LRRTM4-203ENST00000409282 DNAJC5Q9H3Z4 198 aa7.84□□□□□ -1.15
LRRTM4-203ENST00000409282 HRCP23327 699 aa7.66□□□□□ -1.18
LRRTM4-203ENST00000409282 RB1CC1Q8TDY2 1594 aa7.66□□□□□ -1.18
LRRTM4-203ENST00000409282 DAXXQ9UER7 740 aaPredicted RBP7.65□□□□□ -1.18
LRRTM4-203ENST00000409282 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
LRRTM4-203ENST00000409282 SHROOM4Q9ULL8 1493 aa7.53□□□□□ -1.2
LRRTM4-203ENST00000409282 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
LRRTM4-203ENST00000409282 UNC13AQ9UPW8 1703 aa7.5□□□□□ -1.21
LRRTM4-203ENST00000409282 NACADO15069 1562 aa7.49□□□□□ -1.21
LRRTM4-203ENST00000409282 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
LRRTM4-203ENST00000409282 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
LRRTM4-203ENST00000409282 CUX2O14529 1486 aa7.44□□□□□ -1.22
LRRTM4-203ENST00000409282 EIF5BO60841 1220 aaKnown RBP7.38□□□□□ -1.23
LRRTM4-203ENST00000409282 BICRAQ9NZM4 1560 aa7.38□□□□□ -1.23
LRRTM4-203ENST00000409282 CC2D2AQ9P2K1 1620 aa7.37□□□□□ -1.23
LRRTM4-203ENST00000409282 CECR2Q9BXF3 1484 aa7.37□□□□□ -1.23
LRRTM4-203ENST00000409282 MYO15BQ96JP2 1530 aa7.33□□□□□ -1.24
LRRTM4-203ENST00000409282 PPARGC1BQ86YN6 1023 aaKnown RBP7.24□□□□□ -1.25
LRRTM4-203ENST00000409282 ANP32EQ9BTT0 268 aa7.24□□□□□ -1.25
LRRTM4-203ENST00000409282 ACIN1Q9UKV3 1341 aaKnown RBP7.24□□□□□ -1.25
LRRTM4-203ENST00000409282 EIF4G1Q04637 1599 aaKnown RBP7.24□□□□□ -1.25
LRRTM4-203ENST00000409282 UBE2Q2Q8WVN8 375 aa7.2□□□□□ -1.26
LRRTM4-203ENST00000409282 PHF23Q9BUL5 403 aaPredicted RBP7.19□□□□□ -1.26
LRRTM4-203ENST00000409282 SENP3Q9H4L4 574 aaPredicted RBP7.16□□□□□ -1.26
LRRTM4-203ENST00000409282 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
LRRTM4-203ENST00000409282 PABPN1Q86U42 306 aaKnown RBP eCLIP7.15□□□□□ -1.27
LRRTM4-203ENST00000409282 GTF3C3Q9Y5Q9 886 aa7.14□□□□□ -1.27
LRRTM4-203ENST00000409282 NEUROD1Q13562 356 aa7.08□□□□□ -1.28
LRRTM4-203ENST00000409282 NCBP3Q53F19 620 aaKnown RBP7.08□□□□□ -1.28
LRRTM4-203ENST00000409282 CSRNP3Q8WYN3 585 aa7.07□□□□□ -1.28
LRRTM4-203ENST00000409282 PLEKHG5O94827 1062 aa7.06□□□□□ -1.28
LRRTM4-203ENST00000409282 PODXL2Q9NZ53 605 aa7.06□□□□□ -1.28
LRRTM4-203ENST00000409282 PCGF6Q9BYE7 350 aa7.05□□□□□ -1.28
LRRTM4-203ENST00000409282 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
LRRTM4-203ENST00000409282 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
LRRTM4-203ENST00000409282 ARXQ96QS3 562 aa7.02□□□□□ -1.29
LRRTM4-203ENST00000409282 ERCC6Q03468 1493 aa7.02□□□□□ -1.29
LRRTM4-203ENST00000409282 ANO8Q9HCE9 1232 aaPredicted RBP7.01□□□□□ -1.29
LRRTM4-203ENST00000409282 TRIM41Q8WV44 630 aa7.01□□□□□ -1.29
LRRTM4-203ENST00000409282 PKNOX2Q96KN3 472 aa6.99□□□□□ -1.29
LRRTM4-203ENST00000409282 ERICH6BQ5W0A0 696 aa6.98□□□□□ -1.29
LRRTM4-203ENST00000409282 DCAF1Q9Y4B6 1507 aa6.97□□□□□ -1.29
LRRTM4-203ENST00000409282 MYT1LQ9UL68 1186 aa6.96□□□□□ -1.29
LRRTM4-203ENST00000409282 BAZ1AQ9NRL2 1556 aaPredicted RBP6.92□□□□□ -1.3
LRRTM4-203ENST00000409282 NEFLP07196 543 aa6.91□□□□□ -1.3
LRRTM4-203ENST00000409282 CLSPNQ9HAW4 1339 aa6.9□□□□□ -1.31
LRRTM4-203ENST00000409282 RIMBP3CA6NJZ7 1639 aa6.87□□□□□ -1.31
LRRTM4-203ENST00000409282 RIMBP3BA6NNM3 1639 aa6.87□□□□□ -1.31
LRRTM4-203ENST00000409282 RIMBP3Q9UFD9 1639 aa6.87□□□□□ -1.31
LRRTM4-203ENST00000409282 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
LRRTM4-203ENST00000409282 HMGXB3Q12766 1538 aa6.84□□□□□ -1.31
LRRTM4-203ENST00000409282 PDIA4P13667 645 aaKnown RBP6.84□□□□□ -1.32
LRRTM4-203ENST00000409282 SALL2Q9Y467 1007 aaPredicted RBP6.84□□□□□ -1.32
LRRTM4-203ENST00000409282 SCRIBQ14160 1630 aa6.83□□□□□ -1.32
LRRTM4-203ENST00000409282 NCAPD3P42695 1498 aa6.83□□□□□ -1.32
LRRTM4-203ENST00000409282 KLHL34Q8N239 644 aa6.83□□□□□ -1.32
LRRTM4-203ENST00000409282 PDE4CQ08493 712 aa6.81□□□□□ -1.32
LRRTM4-203ENST00000409282 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
LRRTM4-203ENST00000409282 KIF21AQ7Z4S6 1674 aa6.8□□□□□ -1.32
LRRTM4-203ENST00000409282 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
LRRTM4-203ENST00000409282 WDR62O43379 1518 aa6.79□□□□□ -1.32
LRRTM4-203ENST00000409282 FOXD1Q16676 465 aa6.78□□□□□ -1.32
LRRTM4-203ENST00000409282 GLIPR1L2Q4G1C9 344 aa6.77□□□□□ -1.33
LRRTM4-203ENST00000409282 TIMELESSQ9UNS1 1208 aa6.76□□□□□ -1.33
LRRTM4-203ENST00000409282 SMARCA2P51531 1590 aa6.76□□□□□ -1.33
LRRTM4-203ENST00000409282 FGD1P98174 961 aa6.75□□□□□ -1.33
LRRTM4-203ENST00000409282 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
LRRTM4-203ENST00000409282 HOMEZQ8IX15 550 aa6.74□□□□□ -1.33
LRRTM4-203ENST00000409282 RTN4Q9NQC3 1192 aaKnown RBP6.74□□□□□ -1.33
LRRTM4-203ENST00000409282 ARHGEF11O15085 1522 aa6.74□□□□□ -1.33
LRRTM4-203ENST00000409282 ZCCHC6Q5VYS8 1495 aaKnown RBP6.73□□□□□ -1.33
LRRTM4-203ENST00000409282 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
LRRTM4-203ENST00000409282 MRC2Q9UBG0 1479 aa6.72□□□□□ -1.33
LRRTM4-203ENST00000409282 DIEXFQ68CQ4 756 aaKnown RBP6.72□□□□□ -1.33
LRRTM4-203ENST00000409282 OSCARQ8IYS5 282 aa6.71□□□□□ -1.34
LRRTM4-203ENST00000409282 PDS5BQ9NTI5 1447 aa6.71□□□□□ -1.34
LRRTM4-203ENST00000409282 DEKP35659 375 aaKnown RBP6.7□□□□□ -1.34
LRRTM4-203ENST00000409282 NESP48681 1621 aa6.69□□□□□ -1.34
LRRTM4-203ENST00000409282 ILDR1Q86SU0 546 aaPredicted RBP6.68□□□□□ -1.34
LRRTM4-203ENST00000409282 PLPPR3Q6T4P5 718 aa6.67□□□□□ -1.34
LRRTM4-203ENST00000409282 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
LRRTM4-203ENST00000409282 ERCC6L2Q5T890 1561 aa6.65□□□□□ -1.34
LRRTM4-203ENST00000409282 PEG3Q9GZU2 1588 aa6.65□□□□□ -1.34
LRRTM4-203ENST00000409282 AAMPQ13685 434 aa6.65□□□□□ -1.34
LRRTM4-203ENST00000409282 ZMYND15Q9H091 742 aa6.65□□□□□ -1.34
LRRTM4-203ENST00000409282 ATAD2BQ9ULI0 1458 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms