RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 NISCHQ9Y2I1 1504 aa9.77□□□□□ -0.84
UBE4A-202ENST00000431736 DCAF8L2P0C7V8 631 aa9.25□□□□□ -0.93
UBE4A-202ENST00000431736 ABCC9O60706 1549 aa9.03□□□□□ -0.96
UBE4A-202ENST00000431736 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.02
UBE4A-202ENST00000431736 PABPN1Q86U42 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBE4A-202ENST00000431736 RB1CC1Q8TDY2 1594 aa8.53□□□□□ -1.04
UBE4A-202ENST00000431736 NACADO15069 1562 aa8.38□□□□□ -1.07
UBE4A-202ENST00000431736 SCRIBQ14160 1630 aa8.16□□□□□ -1.1
UBE4A-202ENST00000431736 SHROOM4Q9ULL8 1493 aa8.15□□□□□ -1.1
UBE4A-202ENST00000431736 CECR2Q9BXF3 1484 aa8.14□□□□□ -1.11
UBE4A-202ENST00000431736 ERCC6Q03468 1493 aa8.13□□□□□ -1.11
UBE4A-202ENST00000431736 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
UBE4A-202ENST00000431736 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
UBE4A-202ENST00000431736 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
UBE4A-202ENST00000431736 ZCCHC6Q5VYS8 1495 aaKnown RBP8.02□□□□□ -1.13
UBE4A-202ENST00000431736 DCAF1Q9Y4B6 1507 aa7.96□□□□□ -1.14
UBE4A-202ENST00000431736 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
UBE4A-202ENST00000431736 FBLN2P98095 1184 aa7.89□□□□□ -1.15
UBE4A-202ENST00000431736 CC2D2AQ9P2K1 1620 aa7.89□□□□□ -1.15
UBE4A-202ENST00000431736 EIF4G1Q04637 1599 aaKnown RBP7.87□□□□□ -1.15
UBE4A-202ENST00000431736 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
UBE4A-202ENST00000431736 PDS5BQ9NTI5 1447 aa7.86□□□□□ -1.15
UBE4A-202ENST00000431736 TRHP20396 242 aaPredicted RBP7.83□□□□□ -1.16
UBE4A-202ENST00000431736 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
UBE4A-202ENST00000431736 SMARCA2P51531 1590 aa7.82□□□□□ -1.16
UBE4A-202ENST00000431736 AEBP2Q6ZN18 517 aaPredicted RBP7.82□□□□□ -1.16
UBE4A-202ENST00000431736 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
UBE4A-202ENST00000431736 NPM1P06748 294 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBE4A-202ENST00000431736 OSCARQ8IYS5 282 aa7.76□□□□□ -1.17
UBE4A-202ENST00000431736 BICRAQ9NZM4 1560 aa7.74□□□□□ -1.17
UBE4A-202ENST00000431736 BAZ1AQ9NRL2 1556 aaPredicted RBP7.74□□□□□ -1.17
UBE4A-202ENST00000431736 CUX2O14529 1486 aa7.73□□□□□ -1.17
UBE4A-202ENST00000431736 CHMP7Q8WUX9 453 aaPredicted RBP7.71□□□□□ -1.18
UBE4A-202ENST00000431736 NCAPD3P42695 1498 aa7.68□□□□□ -1.18
UBE4A-202ENST00000431736 ATAD2BQ9ULI0 1458 aa7.67□□□□□ -1.18
UBE4A-202ENST00000431736 UNC13AQ9UPW8 1703 aa7.65□□□□□ -1.18
UBE4A-202ENST00000431736 CADPSQ9ULU8 1353 aa7.65□□□□□ -1.18
UBE4A-202ENST00000431736 TTBK1Q5TCY1 1321 aaPredicted RBP7.65□□□□□ -1.18
UBE4A-202ENST00000431736 CEP164Q9UPV0 1460 aa7.65□□□□□ -1.18
UBE4A-202ENST00000431736 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
UBE4A-202ENST00000431736 CYB5RLQ6IPT4 315 aa7.59□□□□□ -1.19
UBE4A-202ENST00000431736 HMGXB3Q12766 1538 aa7.58□□□□□ -1.2
UBE4A-202ENST00000431736 SMARCA4P51532 1647 aa7.58□□□□□ -1.2
UBE4A-202ENST00000431736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
UBE4A-202ENST00000431736 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
UBE4A-202ENST00000431736 MYT1LQ9UL68 1186 aa7.56□□□□□ -1.2
UBE4A-202ENST00000431736 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
UBE4A-202ENST00000431736 FANCD2Q9BXW9 1451 aa7.55□□□□□ -1.2
UBE4A-202ENST00000431736 ABCC8Q09428 1581 aa7.54□□□□□ -1.2
UBE4A-202ENST00000431736 NESP48681 1621 aa7.52□□□□□ -1.21
UBE4A-202ENST00000431736 ATP1B4Q9UN42 357 aaPredicted RBP7.49□□□□□ -1.21
UBE4A-202ENST00000431736 MROH2BQ7Z745 1585 aa7.47□□□□□ -1.21
UBE4A-202ENST00000431736 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
UBE4A-202ENST00000431736 SOGA1O94964 1423 aa7.44□□□□□ -1.22
UBE4A-202ENST00000431736 ESF1Q9H501 851 aaKnown RBP7.44□□□□□ -1.22
UBE4A-202ENST00000431736 RANGAP1P46060 587 aaPredicted RBP7.43□□□□□ -1.22
UBE4A-202ENST00000431736 RSF1Q96T23 1441 aaPredicted RBP7.42□□□□□ -1.22
UBE4A-202ENST00000431736 TOP2AP11388 1531 aaKnown RBP7.4□□□□□ -1.22
UBE4A-202ENST00000431736 TDRD9Q8NDG6 1382 aaKnown RBP7.39□□□□□ -1.23
UBE4A-202ENST00000431736 APLP2Q06481 763 aa7.38□□□□□ -1.23
UBE4A-202ENST00000431736 WRNQ14191 1432 aaPredicted RBP eCLIP7.37□□□□□ -1.23
UBE4A-202ENST00000431736 ARID4BQ4LE39 1312 aaPredicted RBP7.36□□□□□ -1.23
UBE4A-202ENST00000431736 CFTRP13569 1480 aa7.36□□□□□ -1.23
UBE4A-202ENST00000431736 UBTFP17480 764 aaKnown RBP7.36□□□□□ -1.23
UBE4A-202ENST00000431736 EHMT2Q96KQ7 1210 aa7.35□□□□□ -1.23
UBE4A-202ENST00000431736 WIZO95785 1651 aa7.34□□□□□ -1.23
UBE4A-202ENST00000431736 PLPPR3Q6T4P5 718 aa7.34□□□□□ -1.23
UBE4A-202ENST00000431736 CARMIL2Q6F5E8 1435 aa7.34□□□□□ -1.23
UBE4A-202ENST00000431736 CCDC88BA6NC98 1476 aa7.33□□□□□ -1.24
UBE4A-202ENST00000431736 FAM69CQ0P6D2 419 aa7.33□□□□□ -1.24
UBE4A-202ENST00000431736 CDK11AQ9UQ88 783 aaPredicted RBP7.31□□□□□ -1.24
UBE4A-202ENST00000431736 GRIN2BQ13224 1484 aa7.31□□□□□ -1.24
UBE4A-202ENST00000431736 AQRO60306 1485 aaKnown RBP eCLIP7.31□□□□□ -1.244e-7■■■□□ 18.4
UBE4A-202ENST00000431736 PEG3Q9GZU2 1588 aa7.3□□□□□ -1.24
UBE4A-202ENST00000431736 WDR62O43379 1518 aa7.3□□□□□ -1.24
UBE4A-202ENST00000431736 SYNJ1O43426 1573 aa7.29□□□□□ -1.24
UBE4A-202ENST00000431736 KCNH8Q96L42 1107 aa7.29□□□□□ -1.24
UBE4A-202ENST00000431736 TOPBP1Q92547 1522 aa7.28□□□□□ -1.24
UBE4A-202ENST00000431736 KIF27Q86VH2 1401 aa7.27□□□□□ -1.24
UBE4A-202ENST00000431736 JPH4Q96JJ6 628 aa7.27□□□□□ -1.24
UBE4A-202ENST00000431736 GAPVD1Q14C86 1478 aa7.27□□□□□ -1.25
UBE4A-202ENST00000431736 KIF21AQ7Z4S6 1674 aa7.27□□□□□ -1.25
UBE4A-202ENST00000431736 DNMBPQ6XZF7 1577 aa7.26□□□□□ -1.25
UBE4A-202ENST00000431736 SNAPC4Q5SXM2 1469 aa7.25□□□□□ -1.25
UBE4A-202ENST00000431736 ARID3CA6NKF2 412 aa7.24□□□□□ -1.25
UBE4A-202ENST00000431736 FGD5Q6ZNL6 1462 aa7.24□□□□□ -1.25
UBE4A-202ENST00000431736 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
UBE4A-202ENST00000431736 THOC2Q8NI27 1593 aaKnown RBP7.23□□□□□ -1.25
UBE4A-202ENST00000431736 URB2Q14146 1524 aaKnown RBP7.23□□□□□ -1.25
UBE4A-202ENST00000431736 RAD54L2Q9Y4B4 1467 aa7.22□□□□□ -1.25
UBE4A-202ENST00000431736 PLEKHD1A6NEE1 506 aa7.21□□□□□ -1.25
UBE4A-202ENST00000431736 SYNJ2O15056 1496 aa7.21□□□□□ -1.25
UBE4A-202ENST00000431736 PTPRGP23470 1445 aa7.21□□□□□ -1.25
UBE4A-202ENST00000431736 FHAD1B1AJZ9 1412 aa7.2□□□□□ -1.26
UBE4A-202ENST00000431736 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
UBE4A-202ENST00000431736 CHIC1Q5VXU3 224 aa7.19□□□□□ -1.26
UBE4A-202ENST00000431736 POLA1P09884 1462 aaPredicted RBP7.19□□□□□ -1.26
UBE4A-202ENST00000431736 ZNF608Q9ULD9 1512 aaPredicted RBP7.18□□□□□ -1.26
UBE4A-202ENST00000431736 PRG4Q92954 1404 aaPredicted RBP7.18□□□□□ -1.26
UBE4A-202ENST00000431736 ARHGEF11O15085 1522 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms