RNA–Protein interactions for RNA: ENST00000447474.1

PTMAP3-201, Transcript of prothymosin alpha pseudogene 3, humanhuman

BASIC

Gene PTMAP3, Length 330 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMAP3-201ENST00000447474 NISCHQ9Y2I1 1504 aa9.83□□□□□ -0.84
PTMAP3-201ENST00000447474 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
PTMAP3-201ENST00000447474 AEBP2Q6ZN18 517 aaPredicted RBP9.69□□□□□ -0.86
PTMAP3-201ENST00000447474 CHIC1Q5VXU3 224 aa9.44□□□□□ -0.9
PTMAP3-201ENST00000447474 CCDC180Q9P1Z9 1646 aa9.01□□□□□ -0.97
PTMAP3-201ENST00000447474 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
PTMAP3-201ENST00000447474 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
PTMAP3-201ENST00000447474 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
PTMAP3-201ENST00000447474 AMER1Q5JTC6 1135 aaPredicted RBP8.79□□□□□ -1
PTMAP3-201ENST00000447474 NCBP3Q53F19 620 aaKnown RBP8.76□□□□□ -1.01
PTMAP3-201ENST00000447474 MYT1Q01538 1121 aa8.75□□□□□ -1.01
PTMAP3-201ENST00000447474 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
PTMAP3-201ENST00000447474 PELP1Q8IZL8 1130 aaKnown RBP8.62□□□□□ -1.03
PTMAP3-201ENST00000447474 PLPPR3Q6T4P5 718 aa8.55□□□□□ -1.04
PTMAP3-201ENST00000447474 ABCC9O60706 1549 aa8.54□□□□□ -1.04
PTMAP3-201ENST00000447474 ARXQ96QS3 562 aa8.51□□□□□ -1.05
PTMAP3-201ENST00000447474 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
PTMAP3-201ENST00000447474 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
PTMAP3-201ENST00000447474 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
PTMAP3-201ENST00000447474 RB1CC1Q8TDY2 1594 aa8.37□□□□□ -1.07
PTMAP3-201ENST00000447474 NACADO15069 1562 aa8.36□□□□□ -1.07
PTMAP3-201ENST00000447474 RANGAP1P46060 587 aaPredicted RBP8.36□□□□□ -1.07
PTMAP3-201ENST00000447474 MYO15BQ96JP2 1530 aa8.35□□□□□ -1.07
PTMAP3-201ENST00000447474 KCNA4P22459 653 aa8.35□□□□□ -1.07
PTMAP3-201ENST00000447474 APLP2Q06481 763 aa8.33□□□□□ -1.08
PTMAP3-201ENST00000447474 PHF23Q9BUL5 403 aaPredicted RBP8.31□□□□□ -1.08
PTMAP3-201ENST00000447474 SENP3Q9H4L4 574 aaPredicted RBP8.28□□□□□ -1.08
PTMAP3-201ENST00000447474 DCAF1Q9Y4B6 1507 aa8.26□□□□□ -1.09
PTMAP3-201ENST00000447474 HOMEZQ8IX15 550 aa8.22□□□□□ -1.09
PTMAP3-201ENST00000447474 BCANQ96GW7 911 aa8.22□□□□□ -1.09
PTMAP3-201ENST00000447474 ZCCHC6Q5VYS8 1495 aaKnown RBP8.2□□□□□ -1.1
PTMAP3-201ENST00000447474 PRKCSHP14314 528 aaPredicted RBP8.17□□□□□ -1.1
PTMAP3-201ENST00000447474 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
PTMAP3-201ENST00000447474 BICRAQ9NZM4 1560 aa8.14□□□□□ -1.11
PTMAP3-201ENST00000447474 SHROOM4Q9ULL8 1493 aa8.13□□□□□ -1.11
PTMAP3-201ENST00000447474 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
PTMAP3-201ENST00000447474 SLC4A1APQ9BWU0 796 aaKnown RBP8.1□□□□□ -1.11
PTMAP3-201ENST00000447474 TULP1O00294 542 aaPredicted RBP8.05□□□□□ -1.12
PTMAP3-201ENST00000447474 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
PTMAP3-201ENST00000447474 PLCB2Q00722 1185 aa7.97□□□□□ -1.13
PTMAP3-201ENST00000447474 SCRIBQ14160 1630 aa7.96□□□□□ -1.13
PTMAP3-201ENST00000447474 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
PTMAP3-201ENST00000447474 EIF4G1Q04637 1599 aaKnown RBP7.89□□□□□ -1.15
PTMAP3-201ENST00000447474 PODXL2Q9NZ53 605 aa7.89□□□□□ -1.15
PTMAP3-201ENST00000447474 CC2D2AQ9P2K1 1620 aa7.89□□□□□ -1.15
PTMAP3-201ENST00000447474 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
PTMAP3-201ENST00000447474 DNAJC5BQ9UF47 199 aa7.87□□□□□ -1.15
PTMAP3-201ENST00000447474 EIF5BO60841 1220 aaKnown RBP7.85□□□□□ -1.15
PTMAP3-201ENST00000447474 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
PTMAP3-201ENST00000447474 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
PTMAP3-201ENST00000447474 PABPN1Q86U42 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTMAP3-201ENST00000447474 VSIG10Q8N0Z9 540 aa7.82□□□□□ -1.16
PTMAP3-201ENST00000447474 NPM2Q86SE8 214 aaKnown RBP7.78□□□□□ -1.16
PTMAP3-201ENST00000447474 CECR2Q9BXF3 1484 aa7.74□□□□□ -1.17
PTMAP3-201ENST00000447474 C14orf37Q86TY3 774 aa7.73□□□□□ -1.17
PTMAP3-201ENST00000447474 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
PTMAP3-201ENST00000447474 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
PTMAP3-201ENST00000447474 PEG3Q9GZU2 1588 aa7.71□□□□□ -1.17
PTMAP3-201ENST00000447474 SMARCA4P51532 1647 aa7.71□□□□□ -1.17
PTMAP3-201ENST00000447474 FOXD1Q16676 465 aa7.7□□□□□ -1.18
PTMAP3-201ENST00000447474 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
PTMAP3-201ENST00000447474 SMARCA2P51531 1590 aa7.67□□□□□ -1.18
PTMAP3-201ENST00000447474 BAZ1AQ9NRL2 1556 aaPredicted RBP7.66□□□□□ -1.18
PTMAP3-201ENST00000447474 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
PTMAP3-201ENST00000447474 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
PTMAP3-201ENST00000447474 ATAD2BQ9ULI0 1458 aa7.6□□□□□ -1.19
PTMAP3-201ENST00000447474 FKBP8Q14318 412 aa7.58□□□□□ -1.2
PTMAP3-201ENST00000447474 LAMC3Q9Y6N6 1575 aa7.54□□□□□ -1.2
PTMAP3-201ENST00000447474 MROH2BQ7Z745 1585 aa7.53□□□□□ -1.2
PTMAP3-201ENST00000447474 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
PTMAP3-201ENST00000447474 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
PTMAP3-201ENST00000447474 BAZ1BQ9UIG0 1483 aaKnown RBP7.51□□□□□ -1.21
PTMAP3-201ENST00000447474 ZBTB22O15209 634 aa7.51□□□□□ -1.21
PTMAP3-201ENST00000447474 WIZO95785 1651 aa7.51□□□□□ -1.21
PTMAP3-201ENST00000447474 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
PTMAP3-201ENST00000447474 CDK11AQ9UQ88 783 aaPredicted RBP7.48□□□□□ -1.21
PTMAP3-201ENST00000447474 CUX2O14529 1486 aa7.47□□□□□ -1.21
PTMAP3-201ENST00000447474 ADRA2BP18089 450 aa7.45□□□□□ -1.22
PTMAP3-201ENST00000447474 TRIM26Q12899 539 aaPredicted RBP7.45□□□□□ -1.22
PTMAP3-201ENST00000447474 NBR1Q14596 966 aa7.44□□□□□ -1.22
PTMAP3-201ENST00000447474 KDM2AQ9Y2K7 1162 aa7.43□□□□□ -1.22
PTMAP3-201ENST00000447474 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
PTMAP3-201ENST00000447474 SUPT5HO00267 1087 aaKnown RBP7.41□□□□□ -1.22
PTMAP3-201ENST00000447474 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
PTMAP3-201ENST00000447474 NESP48681 1621 aa7.4□□□□□ -1.22
PTMAP3-201ENST00000447474 CDK11BP21127 795 aaKnown RBP7.38□□□□□ -1.23
PTMAP3-201ENST00000447474 WDR62O43379 1518 aa7.37□□□□□ -1.23
PTMAP3-201ENST00000447474 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
PTMAP3-201ENST00000447474 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
PTMAP3-201ENST00000447474 CCDC9Q9Y3X0 531 aaKnown RBP7.37□□□□□ -1.23
PTMAP3-201ENST00000447474 ERCC6Q03468 1493 aa7.36□□□□□ -1.23
PTMAP3-201ENST00000447474 NPM3O75607 178 aaKnown RBP7.34□□□□□ -1.23
PTMAP3-201ENST00000447474 CFTRP13569 1480 aa7.34□□□□□ -1.23
PTMAP3-201ENST00000447474 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
PTMAP3-201ENST00000447474 CADPSQ9ULU8 1353 aa7.33□□□□□ -1.24
PTMAP3-201ENST00000447474 FBLN2P98095 1184 aa7.33□□□□□ -1.24
PTMAP3-201ENST00000447474 UBTFP17480 764 aaKnown RBP7.32□□□□□ -1.24
PTMAP3-201ENST00000447474 HSP90B1P14625 803 aaKnown RBP7.31□□□□□ -1.24
PTMAP3-201ENST00000447474 MRC2Q9UBG0 1479 aa7.3□□□□□ -1.24
PTMAP3-201ENST00000447474 HRCP23327 699 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms