Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 AC092118.2-201ENST00000613495 667 ntBASIC13.13□□□□□ -0.31
CSDC2Q9Y534 AC005332.8-201ENST00000622750 2735 ntBASIC13.13□□□□□ -0.31
CSDC2Q9Y534 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSDC2Q9Y534 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 AC004911.1-201ENST00000416316 871 ntBASIC13.12□□□□□ -0.31
CSDC2Q9Y534 DUSP5P2-201ENST00000426873 1033 ntBASIC13.12□□□□□ -0.31
CSDC2Q9Y534 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 HLA-B-256ENST00000639848 1089 ntBASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 HCG11-201ENST00000411553 5696 ntBASIC13.12□□□□□ -0.31
CSDC2Q9Y534 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 BCL2-203ENST00000589955 5011 ntBASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSDC2Q9Y534 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.11□□□□□ -0.31
CSDC2Q9Y534 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSDC2Q9Y534 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms