Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX8Q9HC52 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.19■□□□□ 0.98
CBX8Q9HC52 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CBX8Q9HC52 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CBX8Q9HC52 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX8Q9HC52 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX8Q9HC52 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX8Q9HC52 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX8Q9HC52 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.18■□□□□ 0.98
CBX8Q9HC52 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX8Q9HC52 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CBX8Q9HC52 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.17■□□□□ 0.98
CBX8Q9HC52 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 AL121906.2-201ENST00000621597 723 ntBASIC21.17■□□□□ 0.98
CBX8Q9HC52 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CBX8Q9HC52 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CBX8Q9HC52 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.16■□□□□ 0.98
CBX8Q9HC52 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 MIR5787-201ENST00000611784 55 ntBASIC21.16■□□□□ 0.98
CBX8Q9HC52 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.16■□□□□ 0.98
CBX8Q9HC52 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CBX8Q9HC52 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
CBX8Q9HC52 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CBX8Q9HC52 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX8Q9HC52 AL499627.1-201ENST00000569373 2188 ntBASIC21.15■□□□□ 0.98
CBX8Q9HC52 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CBX8Q9HC52 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.15■□□□□ 0.98
CBX8Q9HC52 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.15■□□□□ 0.98
CBX8Q9HC52 MIR935-201ENST00000401179 91 ntBASIC21.15■□□□□ 0.98
CBX8Q9HC52 TUBB8P6-201ENST00000436895 1288 ntBASIC21.15■□□□□ 0.98
CBX8Q9HC52 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms