Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SND1-IT1Q9HBX3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SND1-IT1Q9HBX3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 AL512353.2-201ENST00000448759 1962 ntBASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SND1-IT1Q9HBX3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 MKRN4P-201ENST00000444706 1521 ntBASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 KRT18P11-201ENST00000435214 1283 ntBASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 CYP2T3P-201ENST00000601990 817 ntBASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 AC018553.1-201ENST00000616682 1458 ntBASIC12.69□□□□□ -0.38
SND1-IT1Q9HBX3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms