Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MIR4651-201ENST00000582622 73 ntBASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC68Q9H2F9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC68Q9H2F9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 TSPY21P-201ENST00000433481 731 ntBASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 IRX1P1-201ENST00000438849 1838 ntBASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC68Q9H2F9 AL049812.1-201ENST00000432563 2267 ntBASIC19■□□□□ 0.63
CCDC68Q9H2F9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 AC004408.2-201ENST00000623613 2777 ntBASIC19■□□□□ 0.63
CCDC68Q9H2F9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC68Q9H2F9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC68Q9H2F9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 AP002982.1-201ENST00000492365 877 ntBASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC68Q9H2F9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC68Q9H2F9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC68Q9H2F9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC68Q9H2F9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms