Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC46A2Q9BY10 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 KRT18P48-201ENST00000434763 852 ntBASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 SEC1P-202ENST00000473944 940 ntBASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC46A2Q9BY10 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 AL512353.2-201ENST00000448759 1962 ntBASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 HCG4P8-203ENST00000443049 980 ntBASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 KRT126P-201ENST00000549467 1181 ntBASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC46A2Q9BY10 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC46A2Q9BY10 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC46A2Q9BY10 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC46A2Q9BY10 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC46A2Q9BY10 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC46A2Q9BY10 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms