Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 KRT16P5-201ENST00000455284 522 ntBASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 AC142381.4-202ENST00000563973 229 ntBASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 RN7SL471P-201ENST00000580476 299 ntBASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 KRT8P11-201ENST00000409686 1436 ntBASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERPUD2Q9BSE4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AC126763.1-201ENST00000552015 2118 ntBASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AL499627.1-201ENST00000569373 2188 ntBASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AC133681.1-201ENST00000465482 601 ntBASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AL390961.4-201ENST00000623958 2535 ntBASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERPUD2Q9BSE4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AC004980.1-204ENST00000429707 299 ntBASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERPUD2Q9BSE4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.64■□□□□ 0.74
HERPUD2Q9BSE4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 AL158047.1-201ENST00000445918 881 ntBASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 AP006294.2-201ENST00000641667 209 ntBASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.64■□□□□ 0.73
HERPUD2Q9BSE4 RCC2P6-201ENST00000526625 1557 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms