Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDNQ99608 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NDNQ99608 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
NDNQ99608 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NDNQ99608 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19■□□□□ 0.63
NDNQ99608 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NDNQ99608 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19■□□□□ 0.63
NDNQ99608 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19■□□□□ 0.63
NDNQ99608 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19■□□□□ 0.63
NDNQ99608 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19■□□□□ 0.63
NDNQ99608 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19■□□□□ 0.63
NDNQ99608 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19■□□□□ 0.63
NDNQ99608 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NDNQ99608 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19■□□□□ 0.63
NDNQ99608 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19■□□□□ 0.63
NDNQ99608 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
NDNQ99608 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19■□□□□ 0.63
NDNQ99608 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NDNQ99608 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19■□□□□ 0.63
NDNQ99608 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NDNQ99608 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.99■□□□□ 0.63
NDNQ99608 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.99■□□□□ 0.63
NDNQ99608 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.99■□□□□ 0.63
NDNQ99608 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.99■□□□□ 0.63
NDNQ99608 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.99■□□□□ 0.63
NDNQ99608 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.99■□□□□ 0.63
NDNQ99608 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 FEM1AP3-201ENST00000403722 1741 ntBASIC18.99■□□□□ 0.63
NDNQ99608 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.99■□□□□ 0.63
NDNQ99608 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.99■□□□□ 0.63
NDNQ99608 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
NDNQ99608 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NDNQ99608 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NDNQ99608 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.98■□□□□ 0.63
NDNQ99608 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.98■□□□□ 0.63
NDNQ99608 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.98■□□□□ 0.63
NDNQ99608 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.98■□□□□ 0.63
NDNQ99608 RN7SL471P-201ENST00000580476 299 ntBASIC18.98■□□□□ 0.63
NDNQ99608 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NDNQ99608 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.98■□□□□ 0.63
NDNQ99608 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NDNQ99608 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NDNQ99608 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.97■□□□□ 0.63
NDNQ99608 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NDNQ99608 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NDNQ99608 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NDNQ99608 AC128676.1-201ENST00000454392 318 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms